first implementation of fields
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@ -42,9 +42,15 @@
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schema:
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type: boolean
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example: false
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- name: fields
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description: the fields to include in the output as array, defaults to ['_id','number','type','batch','material_id','color','condition','note_id','user_id','added']
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in: query
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schema:
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type: string
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example: '&fields[]=number&fields[]=batch'
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responses:
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200:
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description: samples overview
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description: samples overview (if the csv parameter is set, this is in CSV instead of JSON format)
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content:
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application/json:
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schema:
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@ -3,7 +3,7 @@ import cfenv from 'cfenv';
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import _ from 'lodash';
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import ChangelogModel from './models/changelog';
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// mongoose.set('debug', true); // enable mongoose debug
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mongoose.set('debug', true); // enable mongoose debug
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// database urls, prod db url is retrieved automatically
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const TESTING_URL = 'mongodb://localhost/dfopdb_test';
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@ -48,8 +48,9 @@ app.use(require('./helpers/authorize')); // handle authentication
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// redirect /api routes for Angular proxy in development
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if (process.env.NODE_ENV !== 'production') {
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app.use('/api/:url([^]+)', (req, ignore) => {
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app.use('/api/:url([^]+)', (req, res) => {
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req.url = '/' + req.params.url;
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app.handle(req, res);
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});
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}
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@ -259,6 +259,33 @@ describe('/sample', () => {
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done();
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});
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});
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it('returns only the fields specified', done => {
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TestHelper.request(server, done, {
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method: 'get',
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url: '/samples?status=all&page-size=1&fields[]=number&fields[]=condition&fields[]=color&fields[]=material.name&fields[]=material.mineral',
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auth: {basic: 'janedoe'},
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httpStatus: 200,
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res: [{number: '1', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, color: 'black', material: {name: 'Schulamid 66 GF 25 H', mineral: 0}}]
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});
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});
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it('rejects an invalid fields parameter', done => {
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TestHelper.request(server, done, {
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method: 'get',
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url: '/samples?status=all&page-size=1&fields=number',
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auth: {basic: 'janedoe'},
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httpStatus: 400,
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res: {status: 'Invalid body format', details: '"fields" must be an array'}
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});
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});
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it('rejects an unknown field name', done => {
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TestHelper.request(server, done, {
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method: 'get',
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url: '/samples?status=all&page-size=1&fields[]=xx',
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auth: {basic: 'janedoe'},
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httpStatus: 400,
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res: {status: 'Invalid body format', details: '"fields[0]" must be one of [_id, color, number, type, batch, added, material.name, material.supplier, material.group, material.mineral, material.glass_fiber, material.carbon_fiber, material.number, condition, material_id, note_id, user_id, material._id, material.numbers]'}
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});
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});
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it('rejects a negative page size', done => {
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TestHelper.request(server, done, {
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method: 'get',
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@ -302,7 +329,7 @@ describe('/sample', () => {
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httpStatus: 401
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});
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});
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});
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}); // TODO: measurement fields
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describe('GET /samples/{state}', () => {
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it('returns all new samples', done => {
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@ -48,19 +48,17 @@ router.get('/samples', async (req, res, next) => {
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filters['to-page'] = 0;
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}
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if (filters.sort[0].indexOf('material.') >= 0) { // need to populate materials, material supplier and group
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query.push(
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{$lookup: {from: 'materials', localField: 'material_id', foreignField: '_id', as: 'material'}},
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{$set: {material: { $arrayElemAt: ['$material', 0]}}},
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{$lookup: { from: 'material_groups', localField: 'material.group_id', foreignField: '_id', as: 'material.group' }},
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{$set: {'material.group': { $arrayElemAt: ['$material.group.name', 0]}}},
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{$lookup: { from: 'material_suppliers', localField: 'material.supplier_id', foreignField: '_id', as: 'material.supplier'}},
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{$set: {'material.supplier': {$arrayElemAt: ['$material.supplier.name', 0]}}},
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{$set: {'material.number': { $arrayElemAt: ['$material.numbers.number', {$indexOfArray: ['$material.numbers.color', '$color']}]}
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}
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query.push(
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{$lookup: {from: 'materials', localField: 'material_id', foreignField: '_id', as: 'material'}},
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{$set: {material: { $arrayElemAt: ['$material', 0]}}},
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{$lookup: { from: 'material_groups', localField: 'material.group_id', foreignField: '_id', as: 'material.group' }},
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{$set: {'material.group': { $arrayElemAt: ['$material.group.name', 0]}}},
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{$lookup: { from: 'material_suppliers', localField: 'material.supplier_id', foreignField: '_id', as: 'material.supplier'}},
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{$set: {'material.supplier': {$arrayElemAt: ['$material.supplier.name', 0]}}},
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{$set: {'material.number': { $arrayElemAt: ['$material.numbers.number', {$indexOfArray: ['$material.numbers.color', '$color']}]}
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}
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);
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}
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}
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);
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if (filters['from-id']) { // from-id specified
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const fromSample = await SampleModel.findById(filters['from-id']).lean().exec().catch(err => {next(err);});
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@ -79,9 +77,9 @@ router.get('/samples', async (req, res, next) => {
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query.push({$sort: {[filters.sort[0]]: filters.sort[1], '_id': filters.sort[1]}}); // set _id as secondary sort
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}
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if (filters.sort[0].indexOf('material.') >= 0) { // unpopulate materials again
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query.push({$unset: 'material'});
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}
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// if (filters.sort[0].indexOf('material.') >= 0) { // unpopulate materials again
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// query.push({$unset: 'material'});
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// }
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if (filters['to-page']) {
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query.push({$skip: Math.abs(filters['to-page'] + Number(filters['to-page'] < 0)) * filters['page-size'] + Number(filters['to-page'] < 0)}) // number to skip, if going back pages, one page has to be skipped less but on sample more
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@ -90,6 +88,16 @@ router.get('/samples', async (req, res, next) => {
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if (filters['page-size']) {
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query.push({$limit: filters['page-size']});
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}
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console.log(filters.fields);
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const projection = filters.fields.reduce((s, e) => {s[e] = true; return s; }, {});
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if (filters.fields.indexOf('added') >= 0) { // add added date
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projection.added = {$toDate: '$_id'};
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}
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if (!(filters.fields.indexOf('_id') >= 0)) { // disable _id explicitly
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console.log('disable id');
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projection._id = false;
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}
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query.push({$project: projection});
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SampleModel.aggregate(query).exec((err, data) => {
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if (err) return next(err);
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@ -97,14 +105,14 @@ router.get('/samples', async (req, res, next) => {
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data.reverse();
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}
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if (filters.csv) { // output as csv // TODO: csv example in OAS
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csv(_.compact(data.map(e => SampleValidate.output(e))), ['_id', 'number'], (err, data) => {
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csv(_.compact(data.map(e => SampleValidate.output(e, 'refs'))), ['_id', 'number'], (err, data) => {
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if (err) return next(err);
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res.set('Content-Type', 'text/csv');
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res.send(data);
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});
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}
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else {
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res.json(_.compact(data.map(e => SampleValidate.output(e)))); // validate all and filter null values from validation errors
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res.json(_.compact(data.map(e => SampleValidate.output(e, 'refs')))); // validate all and filter null values from validation errors
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}
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})
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});
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@ -51,6 +51,32 @@ export default class SampleValidate {
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.min('1970-01-01T00:00:00.000Z')
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};
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private static sortKeys = [
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'_id',
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'color',
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'number',
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'type',
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'batch',
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'added',
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'material.name',
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'material.supplier',
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'material.group',
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'material.mineral',
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'material.glass_fiber',
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'material.carbon_fiber',
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'material.number'
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];
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private static fieldKeys = [
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...SampleValidate.sortKeys,
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'condition',
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'material_id',
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'note_id',
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'user_id',
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'material._id',
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'material.numbers'
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];
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static input (data, param) { // validate input, set param to 'new' to make all attributes required
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if (param === 'new') {
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return Joi.object({
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@ -88,8 +114,11 @@ export default class SampleValidate {
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}
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}
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static output (data, param = 'refs') { // validate output and strip unwanted properties, returns null if not valid
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data.added = data._id.getTimestamp();
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static output (data, param = 'refs+added') { // validate output and strip unwanted properties, returns null if not valid
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if (param === 'refs+added') {
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param = 'refs';
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data.added = data._id.getTimestamp();
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}
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data = IdValidate.stringify(data);
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let joiObject;
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if (param === 'refs') {
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@ -101,6 +130,7 @@ export default class SampleValidate {
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batch: this.sample.batch,
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condition: this.sample.condition,
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material_id: IdValidate.get(),
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material: MaterialValidate.outputV(),
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note_id: IdValidate.get().allow(null),
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user_id: IdValidate.get(),
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added: this.sample.added
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@ -133,8 +163,9 @@ export default class SampleValidate {
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'from-id': IdValidate.get(),
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'to-page': Joi.number().integer(),
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'page-size': Joi.number().integer().min(1),
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sort: Joi.string().pattern(/^(_id|color|number|type|batch|added|material\.name|material\.supplier|material\.group|material\.mineral|material\.glass_fiber|material\.carbon_fiber|material\.number)-(asc|desc)$/m).default('_id-asc'),
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csv: Joi.boolean().default(false)
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sort: Joi.string().pattern(new RegExp('^(' + this.sortKeys.join('|').replace(/\./g, '\\.') + ')-(asc|desc)$', 'm')).default('_id-asc'),
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csv: Joi.boolean().default(false),
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fields: Joi.array().items(Joi.string().valid(...this.fieldKeys)).default(['_id','number','type','batch','material_id','color','condition','note_id','user_id','added'])
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}).with('to-page', 'page-size').validate(data);
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}
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}
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