banana/definma-api
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Properly indent all source files

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This commit is contained in:
Kai S. K. Engelbart 2021-01-25 12:57:29 +01:00
parent 0e37956bdb
commit 7c5b6ec605
51 changed files with 9380 additions and 9380 deletions
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4
package-lock.json generated
View File

@ -1,6 +1,6 @@
{
"name": "dfop-api",
"version": "1.0.0",
"name": "definma-api",
"version": "0.9.1",
"lockfileVersion": 1,
"requires": true,
"dependencies": {

164
src/customTypes/express.ts
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@ -9,10 +9,10 @@
/* =================== USAGE ===================
import * as express from "express";
let app = express();
import * as express from "express";
let app = express();
=============================================== */
=============================================== */
/// <reference types="express-serve-static-core" />
/// <reference types="serve-static" />
@ -28,96 +28,96 @@ import * as qs from "qs";
declare function e(): core.Express;
declare namespace e {
/**
* This is a built-in middleware function in Express. It parses incoming requests with JSON payloads and is based on
* body-parser.
* @since 4.16.0
*/
let json: typeof bodyParser.json;
/**
* This is a built-in middleware function in Express. It parses incoming requests with JSON payloads and is based on
* body-parser.
* @since 4.16.0
*/
let json: typeof bodyParser.json;
/**
* This is a built-in middleware function in Express. It parses incoming requests with Buffer payloads and is based
* on body-parser.
* @since 4.17.0
*/
let raw: typeof bodyParser.raw;
/**
* This is a built-in middleware function in Express. It parses incoming requests with Buffer payloads and is based
* on body-parser.
* @since 4.17.0
*/
let raw: typeof bodyParser.raw;
/**
* This is a built-in middleware function in Express. It parses incoming requests with text payloads and is based on
* body-parser.
* @since 4.17.0
*/
let text: typeof bodyParser.text;
/**
* This is a built-in middleware function in Express. It parses incoming requests with text payloads and is based on
* body-parser.
* @since 4.17.0
*/
let text: typeof bodyParser.text;
/**
* These are the exposed prototypes.
*/
let application: Application;
let request: Request;
let response: Response;
/**
* These are the exposed prototypes.
*/
let application: Application;
let request: Request;
let response: Response;
/**
* This is a built-in middleware function in Express. It serves static files and is based on serve-static.
*/
let static: typeof serveStatic;
/**
* This is a built-in middleware function in Express. It serves static files and is based on serve-static.
*/
let static: typeof serveStatic;
/**
* This is a built-in middleware function in Express. It parses incoming requests with urlencoded payloads and is
* based on body-parser.
* @since 4.16.0
*/
let urlencoded: typeof bodyParser.urlencoded;
/**
* This is a built-in middleware function in Express. It parses incoming requests with urlencoded payloads and is
* based on body-parser.
* @since 4.16.0
*/
let urlencoded: typeof bodyParser.urlencoded;
/**
* This is a built-in middleware function in Express. It parses incoming request query parameters.
*/
export function query(options: qs.IParseOptions | typeof qs.parse): Handler;
/**
* This is a built-in middleware function in Express. It parses incoming request query parameters.
*/
export function query(options: qs.IParseOptions | typeof qs.parse): Handler;
export function Router(options?: RouterOptions): core.Router;
export function Router(options?: RouterOptions): core.Router;
interface RouterOptions {
/**
* Enable case sensitivity.
*/
caseSensitive?: boolean;
interface RouterOptions {
/**
* Enable case sensitivity.
*/
caseSensitive?: boolean;
/**
* Preserve the req.params values from the parent router.
* If the parent and the child have conflicting param names, the child’s value take precedence.
*
* @default false
* @since 4.5.0
*/
mergeParams?: boolean;
/**
* Preserve the req.params values from the parent router.
* If the parent and the child have conflicting param names, the child’s value take precedence.
*
* @default false
* @since 4.5.0
*/
mergeParams?: boolean;
/**
* Enable strict routing.
*/
strict?: boolean;
}
/**
* Enable strict routing.
*/
strict?: boolean;
}
interface Application extends core.Application { }
interface CookieOptions extends core.CookieOptions { }
interface Errback extends core.Errback { }
interface ErrorRequestHandler<P extends core.Params = core.ParamsDictionary, ResBody = any, ReqBody = any,
ReqQuery = core.Query>
extends core.ErrorRequestHandler<P, ResBody, ReqBody, ReqQuery> { }
interface Express extends core.Express { }
interface Handler extends core.Handler { }
interface IRoute extends core.IRoute { }
interface IRouter extends core.IRouter { }
interface IRouterHandler<T> extends core.IRouterHandler<T> { }
interface IRouterMatcher<T> extends core.IRouterMatcher<T> { }
interface MediaType extends core.MediaType { }
interface NextFunction extends core.NextFunction { }
interface Request<P extends core.Params = core.ParamsDictionary, ResBody = any, ReqBody = any,
ReqQuery = core.Query> extends core.Request<P, ResBody, ReqBody, ReqQuery> { }
interface RequestHandler<P extends core.Params = core.ParamsDictionary, ResBody = any, ReqBody = any,
ReqQuery = core.Query> extends core.RequestHandler<P, ResBody, ReqBody, ReqQuery> { }
interface RequestParamHandler extends core.RequestParamHandler { }
export interface Response<ResBody = any> extends core.Response<ResBody> { }
interface Router extends core.Router { }
interface Send extends core.Send { }
interface Application extends core.Application { }
interface CookieOptions extends core.CookieOptions { }
interface Errback extends core.Errback { }
interface ErrorRequestHandler<P extends core.Params = core.ParamsDictionary, ResBody = any, ReqBody = any,
ReqQuery = core.Query>
extends core.ErrorRequestHandler<P, ResBody, ReqBody, ReqQuery> { }
interface Express extends core.Express { }
interface Handler extends core.Handler { }
interface IRoute extends core.IRoute { }
interface IRouter extends core.IRouter { }
interface IRouterHandler<T> extends core.IRouterHandler<T> { }
interface IRouterMatcher<T> extends core.IRouterMatcher<T> { }
interface MediaType extends core.MediaType { }
interface NextFunction extends core.NextFunction { }
interface Request<P extends core.Params = core.ParamsDictionary, ResBody = any, ReqBody = any,
ReqQuery = core.Query> extends core.Request<P, ResBody, ReqBody, ReqQuery> { }
interface RequestHandler<P extends core.Params = core.ParamsDictionary, ResBody = any, ReqBody = any,
ReqQuery = core.Query> extends core.RequestHandler<P, ResBody, ReqBody, ReqQuery> { }
interface RequestParamHandler extends core.RequestParamHandler { }
export interface Response<ResBody = any> extends core.Response<ResBody> { }
interface Router extends core.Router { }
interface Send extends core.Send { }
}
export = e;

190
src/helpers/authorize.ts
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@ -9,111 +9,111 @@ import globals from '../globals';
// req.authDetails returns eg. {methods: ['basic'], username: 'johndoe', level: 'write'}
module.exports = async (req, res, next) => {
let givenMethod = ''; // authorization method given by client, basic taken preferred
let user = {name: '', level: '', id: '', location: '', models: []}; // user object
let givenMethod = ''; // authorization method given by client, basic taken preferred
let user = {name: '', level: '', id: '', location: '', models: []}; // user object
// test authentications
const userBasic = await basic(req, next);
// test authentications
const userBasic = await basic(req, next);
if (userBasic) { // basic available
givenMethod = 'basic';
user = userBasic;
}
else { // if basic not available, test key
const userKey = await key(req, next);
if (userKey) {
givenMethod = 'key';
user = userKey;
}
}
if (userBasic) { // basic available
givenMethod = 'basic';
user = userBasic;
}
else { // if basic not available, test key
const userKey = await key(req, next);
if (userKey) {
givenMethod = 'key';
user = userKey;
}
}
req.auth = (res, levels, method = 'all') => {
if (givenMethod === method || (method === 'all' && givenMethod !== '')) { // method is available
if (levels.indexOf(user.level) > -1) { // level is available
return true;
}
else {
res.status(403).json({status: 'Forbidden'});
return false;
}
}
else {
res.status(401).json({status: 'Unauthorized'});
return false;
}
}
req.auth = (res, levels, method = 'all') => {
if (givenMethod === method || (method === 'all' && givenMethod !== '')) { // method is available
if (levels.indexOf(user.level) > -1) { // level is available
return true;
}
else {
res.status(403).json({status: 'Forbidden'});
return false;
}
}
else {
res.status(401).json({status: 'Unauthorized'});
return false;
}
}
req.authDetails = {
method: givenMethod,
username: user.name,
level: user.level,
id: user.id,
location: user.location,
models: user.models
};
req.authDetails = {
method: givenMethod,
username: user.name,
level: user.level,
id: user.id,
location: user.location,
models: user.models
};
next();
next();
}
function basic (req, next): any { // checks basic auth and returns changed user object
return new Promise(resolve => {
const auth = basicAuth(req);
if (auth !== undefined) { // basic auth available
UserModel.find({name: auth.name, status: globals.status.new}).lean().exec( (err, data: any) => { // find user
if (err) return next(err);
if (data.length === 1) { // one user found
bcrypt.compare(auth.pass, data[0].pass, (err, res) => { // check password
if (err) return next(err);
if (res === true) { // password correct
resolve({
level: Object.entries(globals.levels).find(e => e[1] === data[0].level)[0],
name: data[0].name,
id: data[0]._id.toString(),
location: data[0].location,
models: data[0].models
});
}
else {
resolve(null);
}
});
}
else {
resolve(null);
}
});
}
else {
resolve(null);
}
});
return new Promise(resolve => {
const auth = basicAuth(req);
if (auth !== undefined) { // basic auth available
UserModel.find({name: auth.name, status: globals.status.new}).lean().exec( (err, data: any) => { // find user
if (err) return next(err);
if (data.length === 1) { // one user found
bcrypt.compare(auth.pass, data[0].pass, (err, res) => { // check password
if (err) return next(err);
if (res === true) { // password correct
resolve({
level: Object.entries(globals.levels).find(e => e[1] === data[0].level)[0],
name: data[0].name,
id: data[0]._id.toString(),
location: data[0].location,
models: data[0].models
});
}
else {
resolve(null);
}
});
}
else {
resolve(null);
}
});
}
else {
resolve(null);
}
});
}
function key (req, next): any { // checks API key and returns changed user object
return new Promise(resolve => {
if (req.query.key !== undefined) { // key available
UserModel.find({key: req.query.key, status: globals.status.new}).lean().exec( (err, data: any) => { // find user
if (err) return next(err);
if (data.length === 1) { // one user found
resolve({
level: Object.entries(globals.levels).find(e => e[1] === data[0].level)[0],
name: data[0].name,
id: data[0]._id.toString(),
location: data[0].location,
models: data[0].models
});
if (!/^\/api/m.test(req.url)){
delete req.query.key; // delete query parameter to avoid interference with later validation
}
}
else {
resolve(null);
}
});
}
else {
resolve(null);
}
});
return new Promise(resolve => {
if (req.query.key !== undefined) { // key available
UserModel.find({key: req.query.key, status: globals.status.new}).lean().exec( (err, data: any) => { // find user
if (err) return next(err);
if (data.length === 1) { // one user found
resolve({
level: Object.entries(globals.levels).find(e => e[1] === data[0].level)[0],
name: data[0].name,
id: data[0]._id.toString(),
location: data[0].location,
models: data[0].models
});
if (!/^\/api/m.test(req.url)){
delete req.query.key; // delete query parameter to avoid interference with later validation
}
}
else {
resolve(null);
}
});
}
else {
resolve(null);
}
});
}

6
src/helpers/csv.ts
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@ -2,8 +2,8 @@ import {parseAsync} from 'json2csv';
import flatten from './flatten';
export default function csv(input: any[], f: (err, data) => void) { // parse JSON to CSV
parseAsync(input.map(e => flatten(e)), {includeEmptyRows: true})
.then(csv => f(null, csv))
.catch(err => f(err, null));
parseAsync(input.map(e => flatten(e)), {includeEmptyRows: true})
.then(csv => f(null, csv))
.catch(err => f(err, null));
}

76
src/helpers/flatten.ts
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@ -1,42 +1,42 @@
import globals from '../globals';
export default function flatten (data, keepArray = false) { // flatten object: {a: {b: true}} -> {a.b: true}
const result = {};
function recurse (cur, prop) {
if (Object(cur) !== cur || Object.keys(cur).length === 0) { // simple value
result[prop] = cur;
}
else if (prop === `${globals.spectrum.spectrum}.${globals.spectrum.dpt}`) { // convert spectrum for ML
result[prop + '.labels'] = cur.map(e => parseFloat(e[0]));
result[prop + '.values'] = cur.map(e => parseFloat(e[1]));
}
else if (Array.isArray(cur)) {
if (keepArray) {
result[prop] = cur;
}
else { // array to string
if (cur.length && (Object(cur[0]) !== cur || Object.keys(cur[0]).length === 0)) { // array of non-objects
result[prop] = '[' + cur.join(', ') + ']';
}
else {
let l = 0;
for(let i = 0, l = cur.length; i < l; i++)
recurse(cur[i], prop + "[" + i + "]");
if (l == 0)
result[prop] = [];
}
}
}
else { // object
let isEmpty = true;
for (let p in cur) {
isEmpty = false;
recurse(cur[p], prop ? prop+"."+p : p);
}
if (isEmpty && prop)
result[prop] = {};
}
}
recurse(data, '');
return result;
const result = {};
function recurse (cur, prop) {
if (Object(cur) !== cur || Object.keys(cur).length === 0) { // simple value
result[prop] = cur;
}
else if (prop === `${globals.spectrum.spectrum}.${globals.spectrum.dpt}`) { // convert spectrum for ML
result[prop + '.labels'] = cur.map(e => parseFloat(e[0]));
result[prop + '.values'] = cur.map(e => parseFloat(e[1]));
}
else if (Array.isArray(cur)) {
if (keepArray) {
result[prop] = cur;
}
else { // array to string
if (cur.length && (Object(cur[0]) !== cur || Object.keys(cur[0]).length === 0)) { // array of non-objects
result[prop] = '[' + cur.join(', ') + ']';
}
else {
let l = 0;
for(let i = 0, l = cur.length; i < l; i++)
recurse(cur[i], prop + "[" + i + "]");
if (l == 0)
result[prop] = [];
}
}
}
else { // object
let isEmpty = true;
for (let p in cur) {
isEmpty = false;
recurse(cur[p], prop ? prop+"."+p : p);
}
if (isEmpty && prop)
result[prop] = {};
}
}
recurse(data, '');
return result;
}

160
src/helpers/mail.ts
View File

@ -4,86 +4,86 @@ import axios from 'axios';
export default class Mail{
static readonly address = 'definma@bosch-iot.com'; // email address
static uri: string; // mail API URI
static auth = {username: '', password: ''}; // mail API credentials
static mailPass: string; // mail API generates password
static readonly address = 'definma@bosch-iot.com'; // email address
static uri: string; // mail API URI
static auth = {username: '', password: ''}; // mail API credentials
static mailPass: string; // mail API generates password
static init() {
if (process.env.NODE_ENV === 'production') { // only send mails in production
this.mailPass = Array(64).fill(0).map(() => Math.floor(Math.random() * 10)).join('');
this.uri = JSON.parse(process.env.VCAP_SERVICES).Mail[0].credentials.uri;
this.auth.username = JSON.parse(process.env.VCAP_SERVICES).Mail[0].credentials.username;
this.auth.password = JSON.parse(process.env.VCAP_SERVICES).Mail[0].credentials.password;
axios({ // get registered mail addresses
method: 'get',
url: this.uri + '/management/userDomainMapping',
auth: this.auth
}).then(res => {
return new Promise(async (resolve, reject) => {
try {
if (res.data.addresses.indexOf(this.address) < 0) { // mail address not registered
if (res.data.addresses.length) { // delete wrong registered mail address
await axios({
method: 'delete',
url: this.uri + '/management/mailAddresses/' + res.data.addresses[0],
auth: this.auth
});
}
await axios({ // register right mail address
method: 'post',
url: this.uri + '/management/mailAddresses/' + this.address,
auth: this.auth
});
}
resolve();
}
catch (e) {
reject(e);
}
});
}).then(() => {
return axios({ // set new mail password
method: 'put',
url: this.uri + '/management/mailAddresses/' + this.address + '/password/' + this.mailPass,
auth: this.auth
});
}).then(() => { // init done successfully
console.info('Mail service established successfully');
}).catch(err => { // somewhere an error occurred
console.error(`Mail init error: ${err.request.method} ${err.request.path}: ${err.response.status}`,
err.response.data);
});
}
}
static init() {
if (process.env.NODE_ENV === 'production') { // only send mails in production
this.mailPass = Array(64).fill(0).map(() => Math.floor(Math.random() * 10)).join('');
this.uri = JSON.parse(process.env.VCAP_SERVICES).Mail[0].credentials.uri;
this.auth.username = JSON.parse(process.env.VCAP_SERVICES).Mail[0].credentials.username;
this.auth.password = JSON.parse(process.env.VCAP_SERVICES).Mail[0].credentials.password;
axios({ // get registered mail addresses
method: 'get',
url: this.uri + '/management/userDomainMapping',
auth: this.auth
}).then(res => {
return new Promise(async (resolve, reject) => {
try {
if (res.data.addresses.indexOf(this.address) < 0) { // mail address not registered
if (res.data.addresses.length) { // delete wrong registered mail address
await axios({
method: 'delete',
url: this.uri + '/management/mailAddresses/' + res.data.addresses[0],
auth: this.auth
});
}
await axios({ // register right mail address
method: 'post',
url: this.uri + '/management/mailAddresses/' + this.address,
auth: this.auth
});
}
resolve();
}
catch (e) {
reject(e);
}
});
}).then(() => {
return axios({ // set new mail password
method: 'put',
url: this.uri + '/management/mailAddresses/' + this.address + '/password/' + this.mailPass,
auth: this.auth
});
}).then(() => { // init done successfully
console.info('Mail service established successfully');
}).catch(err => { // somewhere an error occurred
console.error(`Mail init error: ${err.request.method} ${err.request.path}: ${err.response.status}`,
err.response.data);
});
}
}
static send (mailAddress, subject, content, f: (x?) => void = () => {}) { // callback executed empty or with error
if (process.env.NODE_ENV === 'production') { // only send mails in production
axios({
method: 'post',
url: this.uri + '/email',
auth: this.auth,
data: {
recipients: [{to: mailAddress}],
subject: {content: subject},
body: {
content: content,
contentType: "text/html"
},
from: {
eMail: this.address,
password: this.mailPass
}
}
}).then(() => {
f();
}).catch((err) => {
f(err);
});
}
else { // dev dummy replacement
console.info('Sending mail to ' + mailAddress + ': -- ' + subject + ' -- ' + content);
f();
}
}
static send (mailAddress, subject, content, f: (x?) => void = () => {}) { // callback executed empty or with error
if (process.env.NODE_ENV === 'production') { // only send mails in production
axios({
method: 'post',
url: this.uri + '/email',
auth: this.auth,
data: {
recipients: [{to: mailAddress}],
subject: {content: subject},
body: {
content: content,
contentType: "text/html"
},
from: {
eMail: this.address,
password: this.mailPass
}
}
}).then(() => {
f();
}).catch((err) => {
f(err);
});
}
else { // dev dummy replacement
console.info('Sending mail to ' + mailAddress + ': -- ' + subject + ' -- ' + content);
f();
}
}
}

10
src/models/changelog.ts
View File

@ -1,11 +1,11 @@
import mongoose from 'mongoose';
const ChangelogSchema = new mongoose.Schema({
action: String,
collection_name: String,
conditions: mongoose.Schema.Types.Mixed,
data: Object,
user_id: mongoose.Schema.Types.ObjectId
action: String,
collection_name: String,
conditions: mongoose.Schema.Types.Mixed,
data: Object,
user_id: mongoose.Schema.Types.ObjectId
}, {minimize: false, strict: false});
export default mongoose.model<any, mongoose.Model<any, any>>('changelog', ChangelogSchema);

18
src/models/condition_template.ts
View File

@ -2,19 +2,19 @@ import mongoose from 'mongoose';
import db from '../db';
const ConditionTemplateSchema = new mongoose.Schema({
first_id: mongoose.Schema.Types.ObjectId,
name: String,
version: Number,
parameters: [new mongoose.Schema({
name: String,
range: mongoose.Schema.Types.Mixed
} ,{ _id : false })]
first_id: mongoose.Schema.Types.ObjectId,
name: String,
version: Number,
parameters: [new mongoose.Schema({
name: String,
range: mongoose.Schema.Types.Mixed
} ,{ _id : false })]
}, {minimize: false}); // to allow empty objects
// changelog query helper
ConditionTemplateSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('condition_template', ConditionTemplateSchema);

10
src/models/help.ts
View File

@ -2,15 +2,15 @@ import db from '../db';
import mongoose from 'mongoose';
const HelpSchema = new mongoose.Schema({
key: {type: String, index: {unique: true}},
level: String,
text: String
key: {type: String, index: {unique: true}},
level: String,
text: String
}, {minimize: false});
// changelog query helper
HelpSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('help', HelpSchema);

16
src/models/material.ts
View File

@ -4,18 +4,18 @@ import MaterialGroupsModel from '../models/material_groups';
import db from '../db';
const MaterialSchema = new mongoose.Schema({
name: {type: String, index: {unique: true}},
supplier_id: {type: mongoose.Schema.Types.ObjectId, ref: MaterialSupplierModel},
group_id: {type: mongoose.Schema.Types.ObjectId, ref: MaterialGroupsModel},
properties: mongoose.Schema.Types.Mixed,
numbers: [String],
status: String
name: {type: String, index: {unique: true}},
supplier_id: {type: mongoose.Schema.Types.ObjectId, ref: MaterialSupplierModel},
group_id: {type: mongoose.Schema.Types.ObjectId, ref: MaterialGroupsModel},
properties: mongoose.Schema.Types.Mixed,
numbers: [String],
status: String
}, {minimize: false});
// changelog query helper
MaterialSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
MaterialSchema.index({supplier_id: 1});
MaterialSchema.index({group_id: 1});

6
src/models/material_groups.ts
View File

@ -2,13 +2,13 @@ import mongoose from 'mongoose';
import db from '../db';
const MaterialGroupsSchema = new mongoose.Schema({
name: {type: String, index: {unique: true}}
name: {type: String, index: {unique: true}}
});
// changelog query helper
MaterialGroupsSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('material_groups', MaterialGroupsSchema);

6
src/models/material_suppliers.ts
View File

@ -2,13 +2,13 @@ import mongoose from 'mongoose';
import db from '../db';
const MaterialSuppliersSchema = new mongoose.Schema({
name: {type: String, index: {unique: true}}
name: {type: String, index: {unique: true}}
});
// changelog query helper
MaterialSuppliersSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('material_suppliers', MaterialSuppliersSchema);

18
src/models/material_template.ts
View File

@ -2,19 +2,19 @@ import mongoose from 'mongoose';
import db from '../db';
const MaterialTemplateSchema = new mongoose.Schema({
first_id: mongoose.Schema.Types.ObjectId,
name: String,
version: Number,
parameters: [new mongoose.Schema({
name: String,
range: mongoose.Schema.Types.Mixed
} ,{ _id : false })]
first_id: mongoose.Schema.Types.ObjectId,
name: String,
version: Number,
parameters: [new mongoose.Schema({
name: String,
range: mongoose.Schema.Types.Mixed
} ,{ _id : false })]
}, {minimize: false}); // to allow empty objects
// changelog query helper
MaterialTemplateSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('material_template', MaterialTemplateSchema);

12
src/models/measurement.ts
View File

@ -6,16 +6,16 @@ import db from '../db';
const MeasurementSchema = new mongoose.Schema({
sample_id: {type: mongoose.Schema.Types.ObjectId, ref: SampleModel},
values: mongoose.Schema.Types.Mixed,
measurement_template: {type: mongoose.Schema.Types.ObjectId, ref: MeasurementTemplateModel},
status: String
sample_id: {type: mongoose.Schema.Types.ObjectId, ref: SampleModel},
values: mongoose.Schema.Types.Mixed,
measurement_template: {type: mongoose.Schema.Types.ObjectId, ref: MeasurementTemplateModel},
status: String
}, {minimize: false});
// changelog query helper
MeasurementSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
MeasurementSchema.index({sample_id: 1});
MeasurementSchema.index({measurement_template: 1});

18
src/models/measurement_template.ts
View File

@ -2,19 +2,19 @@ import mongoose from 'mongoose';
import db from '../db';
const MeasurementTemplateSchema = new mongoose.Schema({
first_id: mongoose.Schema.Types.ObjectId,
name: String,
version: Number,
parameters: [new mongoose.Schema({
name: String,
range: mongoose.Schema.Types.Mixed
} ,{ _id : false })]
first_id: mongoose.Schema.Types.ObjectId,
name: String,
version: Number,
parameters: [new mongoose.Schema({
name: String,
range: mongoose.Schema.Types.Mixed
} ,{ _id : false })]
}, {minimize: false}); // to allow empty objects
// changelog query helper
MeasurementTemplateSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('measurement_template', MeasurementTemplateSchema);

16
src/models/model.ts
View File

@ -2,18 +2,18 @@ import mongoose from 'mongoose';
import db from '../db';
const ModelSchema = new mongoose.Schema({
group: {type: String, index: {unique: true}},
models: [new mongoose.Schema({
name: String,
url: String,
label: String
} ,{ _id : true })]
group: {type: String, index: {unique: true}},
models: [new mongoose.Schema({
name: String,
url: String,
label: String
} ,{ _id : true })]
});
// changelog query helper
ModelSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
ModelSchema.index({group: 1});

4
src/models/model_file.ts
View File

@ -1,8 +1,8 @@
import mongoose from 'mongoose';
const ModelFileSchema = new mongoose.Schema({
name: {type: String, index: {unique: true}},
data: Buffer
name: {type: String, index: {unique: true}},
data: Buffer
});
export default mongoose.model<any, mongoose.Model<any, any>>('model_file', ModelFileSchema);

16
src/models/note.ts
View File

@ -2,18 +2,18 @@ import mongoose from 'mongoose';
import db from '../db';
const NoteSchema = new mongoose.Schema({
comment: String,
sample_references: [{
sample_id: mongoose.Schema.Types.ObjectId,
relation: String
}],
custom_fields: mongoose.Schema.Types.Mixed
comment: String,
sample_references: [{
sample_id: mongoose.Schema.Types.ObjectId,
relation: String
}],
custom_fields: mongoose.Schema.Types.Mixed
});
// changelog query helper
NoteSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('note', NoteSchema);

8
src/models/note_field.ts
View File

@ -2,14 +2,14 @@ import mongoose from 'mongoose';
import db from '../db';
const NoteFieldSchema = new mongoose.Schema({
name: {type: String, index: {unique: true}},
qty: Number
name: {type: String, index: {unique: true}},
qty: Number
});
// changelog query helper
NoteFieldSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('note_field', NoteFieldSchema);

22
src/models/sample.ts
View File

@ -6,21 +6,21 @@ import UserModel from './user';
import db from '../db';
const SampleSchema = new mongoose.Schema({
number: {type: String, index: {unique: true}},
type: String,
color: String,
batch: String,
condition: mongoose.Schema.Types.Mixed,
material_id: {type: mongoose.Schema.Types.ObjectId, ref: MaterialModel},
note_id: {type: mongoose.Schema.Types.ObjectId, ref: NoteModel},
user_id: {type: mongoose.Schema.Types.ObjectId, ref: UserModel},
status: String
number: {type: String, index: {unique: true}},
type: String,
color: String,
batch: String,
condition: mongoose.Schema.Types.Mixed,
material_id: {type: mongoose.Schema.Types.ObjectId, ref: MaterialModel},
note_id: {type: mongoose.Schema.Types.ObjectId, ref: NoteModel},
user_id: {type: mongoose.Schema.Types.ObjectId, ref: UserModel},
status: String
}, {minimize: false});
// changelog query helper
SampleSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
SampleSchema.index({material_id: 1});
SampleSchema.index({note_id: 1});

22
src/models/user.ts
View File

@ -3,21 +3,21 @@ import db from '../db';
import ModelModel from './model';
const UserSchema = new mongoose.Schema({
name: {type: String, index: {unique: true}},
email: String,
pass: String,
key: String,
level: String,
location: String,
devices: [String],
models: [{type: mongoose.Schema.Types.ObjectId, ref: ModelModel}],
status: String
name: {type: String, index: {unique: true}},
email: String,
pass: String,
key: String,
level: String,
location: String,
devices: [String],
models: [{type: mongoose.Schema.Types.ObjectId, ref: ModelModel}],
status: String
});
// changelog query helper
UserSchema.query.log = function <Q extends mongoose.DocumentQuery<any, any>> (req) {
db.log(req, this);
return this;
db.log(req, this);
return this;
}
export default mongoose.model<any, mongoose.Model<any, any>>('user', UserSchema);

348
src/routes/help.spec.ts
View File

@ -4,181 +4,181 @@ import HelpModel from '../models/help';
describe('/help', () => {
let server;
before(done => TestHelper.before(done));
beforeEach(done => server = TestHelper.beforeEach(server, done));
afterEach(done => TestHelper.afterEach(server, done));
after(done => TestHelper.after(done));
let server;
before(done => TestHelper.before(done));
beforeEach(done => server = TestHelper.beforeEach(server, done));
afterEach(done => TestHelper.afterEach(server, done));
after(done => TestHelper.after(done));
describe('GET /help/{key}', () => {
it('returns the required text', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fsamples',
auth: {basic: 'janedoe'},
httpStatus: 200,
res: {text: 'Samples help', level: 'read'}
});
});
it('returns the required text without authorization if allowed', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fdocumentation',
auth: {basic: 'janedoe'},
httpStatus: 200,
res: {text: 'Documentation help', level: 'none'}
});
});
it('returns 404 for an invalid key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/documentation/database',
httpStatus: 404
});
});
it('returns 404 for an unknown key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/xxx',
auth: {basic: 'janedoe'},
httpStatus: 404
});
});
it('returns 403 for a text with a higher level than given', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fmodels',
auth: {basic: 'janedoe'},
httpStatus: 403
});
});
it('rejects an API key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fsamples',
auth: {api: 'janedoe'},
httpStatus: 401,
});
});
it('rejects an unauthorized request if a level is given', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fsamples',
httpStatus: 401
});
});
});
describe('GET /help/{key}', () => {
it('returns the required text', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fsamples',
auth: {basic: 'janedoe'},
httpStatus: 200,
res: {text: 'Samples help', level: 'read'}
});
});
it('returns the required text without authorization if allowed', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fdocumentation',
auth: {basic: 'janedoe'},
httpStatus: 200,
res: {text: 'Documentation help', level: 'none'}
});
});
it('returns 404 for an invalid key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/documentation/database',
httpStatus: 404
});
});
it('returns 404 for an unknown key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/xxx',
auth: {basic: 'janedoe'},
httpStatus: 404
});
});
it('returns 403 for a text with a higher level than given', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fmodels',
auth: {basic: 'janedoe'},
httpStatus: 403
});
});
it('rejects an API key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fsamples',
auth: {api: 'janedoe'},
httpStatus: 401,
});
});
it('rejects an unauthorized request if a level is given', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/help/%2Fsamples',
httpStatus: 401
});
});
});
describe('POST /help/{key}', () => {
it('changes the required text', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
auth: {basic: 'admin'},
httpStatus: 200,
req: {text: 'New samples help', level: 'write'}
}).end((err, res) => {
if (err) return done(err);
should(res.body).be.eql({status: 'OK'});
HelpModel.find({key: '/samples'}).lean().exec((err, data) => {
if (err) return done(err);
should(data).have.lengthOf(1);
should(data[0]).have.only.keys('_id', 'key', 'text', 'level');
should(data[0]).property('key', '/samples');
should(data[0]).property('text', 'New samples help');
should(data[0]).property('level', 'write');
done();
});
});
});
it('saves a new text', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fmaterials',
auth: {basic: 'admin'},
httpStatus: 200,
req: {text: 'Materials help', level: 'dev'}
}).end((err, res) => {
if (err) return done(err);
should(res.body).be.eql({status: 'OK'});
HelpModel.find({key: '/materials'}).lean().exec((err, data) => {
if (err) return done(err);
should(data).have.lengthOf(1);
should(data[0]).have.only.keys('_id', 'key', 'text', 'level', '__v');
should(data[0]).property('key', '/materials');
should(data[0]).property('text', 'Materials help');
should(data[0]).property('level', 'dev');
done();
});
});
});
it('rejects an API key', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
auth: {key: 'admin'},
httpStatus: 401,
req: {text: 'New samples help', level: 'write'}
});
});
it('rejects a write user', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
auth: {basic: 'janedoe'},
httpStatus: 403,
req: {text: 'New samples help', level: 'write'}
});
});
it('rejects an unauthorized request', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
httpStatus: 401,
req: {text: 'New samples help', level: 'write'}
});
});
});
describe('POST /help/{key}', () => {
it('changes the required text', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
auth: {basic: 'admin'},
httpStatus: 200,
req: {text: 'New samples help', level: 'write'}
}).end((err, res) => {
if (err) return done(err);
should(res.body).be.eql({status: 'OK'});
HelpModel.find({key: '/samples'}).lean().exec((err, data) => {
if (err) return done(err);
should(data).have.lengthOf(1);
should(data[0]).have.only.keys('_id', 'key', 'text', 'level');
should(data[0]).property('key', '/samples');
should(data[0]).property('text', 'New samples help');
should(data[0]).property('level', 'write');
done();
});
});
});
it('saves a new text', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fmaterials',
auth: {basic: 'admin'},
httpStatus: 200,
req: {text: 'Materials help', level: 'dev'}
}).end((err, res) => {
if (err) return done(err);
should(res.body).be.eql({status: 'OK'});
HelpModel.find({key: '/materials'}).lean().exec((err, data) => {
if (err) return done(err);
should(data).have.lengthOf(1);
should(data[0]).have.only.keys('_id', 'key', 'text', 'level', '__v');
should(data[0]).property('key', '/materials');
should(data[0]).property('text', 'Materials help');
should(data[0]).property('level', 'dev');
done();
});
});
});
it('rejects an API key', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
auth: {key: 'admin'},
httpStatus: 401,
req: {text: 'New samples help', level: 'write'}
});
});
it('rejects a write user', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
auth: {basic: 'janedoe'},
httpStatus: 403,
req: {text: 'New samples help', level: 'write'}
});
});
it('rejects an unauthorized request', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/help/%2Fsamples',
httpStatus: 401,
req: {text: 'New samples help', level: 'write'}
});
});
});
describe('DELETE /help/{key}', () => {
it('deletes the required entry', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).be.eql({status: 'OK'});
HelpModel.find({key: '/materials'}).lean().exec((err, data) => {
if (err) return done(err);
should(data).have.lengthOf(0);
done();
});
});
});
it('rejects an API key', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
auth: {key: 'admin'},
httpStatus: 401
});
});
it('rejects a write user', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
auth: {basic: 'janedoe'},
httpStatus: 403
});
});
it('rejects an unauthorized request', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
httpStatus: 401
});
});
});
describe('DELETE /help/{key}', () => {
it('deletes the required entry', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).be.eql({status: 'OK'});
HelpModel.find({key: '/materials'}).lean().exec((err, data) => {
if (err) return done(err);
should(data).have.lengthOf(0);
done();
});
});
});
it('rejects an API key', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
auth: {key: 'admin'},
httpStatus: 401
});
});
it('rejects a write user', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
auth: {basic: 'janedoe'},
httpStatus: 403
});
});
it('rejects an unauthorized request', done => {
TestHelper.request(server, done, {
method: 'delete',
url: '/help/%2Fsamples',
httpStatus: 401
});
});
});
});

66
src/routes/help.ts
View File

@ -7,49 +7,49 @@ import globals from '../globals';
const router = express.Router();
router.get('/help/:key', (req, res, next) => {
const {error: paramError, value: key} = HelpValidate.params(req.params);
if (paramError) return res400(paramError, res);
const {error: paramError, value: key} = HelpValidate.params(req.params);
if (paramError) return res400(paramError, res);
HelpModel.findOne(key).lean().exec((err, data) => {
if (err) return next(err);
HelpModel.findOne(key).lean().exec((err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (data.level !== 'none') { // check level
if (!req.auth(res,
Object.values(globals.levels).slice(Object.values(globals.levels).findIndex(e => e === data.level))
, 'basic')) return;
}
res.json(HelpValidate.output(data));
})
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (data.level !== 'none') { // check level
if (!req.auth(res,
Object.values(globals.levels).slice(Object.values(globals.levels).findIndex(e => e === data.level))
, 'basic')) return;
}
res.json(HelpValidate.output(data));
})
});
router.post('/help/:key', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error: paramError, value: key} = HelpValidate.params(req.params);
if (paramError) return res400(paramError, res);
const {error, value: help} = HelpValidate.input(req.body);
if (error) return res400(error, res);
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error: paramError, value: key} = HelpValidate.params(req.params);
if (paramError) return res400(paramError, res);
const {error, value: help} = HelpValidate.input(req.body);
if (error) return res400(error, res);
HelpModel.findOneAndUpdate(key, help, {upsert: true}).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'});
});
HelpModel.findOneAndUpdate(key, help, {upsert: true}).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'});
});
});
router.delete('/help/:key', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error: paramError, value: key} = HelpValidate.params(req.params);
if (paramError) return res400(paramError, res);
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error: paramError, value: key} = HelpValidate.params(req.params);
if (paramError) return res400(paramError, res);
HelpModel.findOneAndDelete(key).log(req).lean().exec((err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
HelpModel.findOneAndDelete(key).log(req).lean().exec((err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
});
module.exports = router;

2202
src/routes/material.spec.ts
View File

File diff suppressed because it is too large Load Diff

350
src/routes/material.ts
View File

@ -19,169 +19,169 @@ import globals from '../globals';
const router = express.Router();
router.get('/materials', (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
const {error, value: filters} =
MaterialValidate.query(req.query, ['dev', 'admin'].indexOf(req.authDetails.level) >= 0);
if (error) return res400(error, res);
const {error, value: filters} =
MaterialValidate.query(req.query, ['dev', 'admin'].indexOf(req.authDetails.level) >= 0);
if (error) return res400(error, res);
MaterialModel.find(filters).sort({name: 1}).populate('group_id').populate('supplier_id')
.lean().exec((err, data) => {
if (err) return next(err);
MaterialModel.find(filters).sort({name: 1}).populate('group_id').populate('supplier_id')
.lean().exec((err, data) => {
if (err) return next(err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.output(e, true))));
});
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.output(e, true))));
});
});
router.get(`/materials/:state(${globals.status.new}|${globals.status.del})`, (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
MaterialModel.find({status: req.params.state}).populate('group_id').populate('supplier_id')
.lean().exec((err, data) => {
if (err) return next(err);
MaterialModel.find({status: req.params.state}).populate('group_id').populate('supplier_id')
.lean().exec((err, data) => {
if (err) return next(err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.output(e))));
});
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.output(e))));
});
});
router.get('/material/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
MaterialModel.findById(req.params.id).populate('group_id').populate('supplier_id').lean().exec((err, data: any) => {
if (err) return next(err);
MaterialModel.findById(req.params.id).populate('group_id').populate('supplier_id').lean().exec((err, data: any) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (!data) {
return res.status(404).json({status: 'Not found'});
}
// deleted materials only available for dev/admin
if (data.status === globals.status.del && !req.auth(res, ['dev', 'admin'], 'all')) return;
res.json(MaterialValidate.output(data));
});
// deleted materials only available for dev/admin
if (data.status === globals.status.del && !req.auth(res, ['dev', 'admin'], 'all')) return;
res.json(MaterialValidate.output(data));
});
});
router.put('/material/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
let {error, value: material} = MaterialValidate.input(req.body, 'change');
if (error) return res400(error, res);
let {error, value: material} = MaterialValidate.input(req.body, 'change');
if (error) return res400(error, res);
MaterialModel.findById(req.params.id).lean().exec(async (err, materialData: any) => {
if (!materialData) {
return res.status(404).json({status: 'Not found'});
}
if (materialData.status === 'deleted') {
return res.status(403).json({status: 'Forbidden'});
}
if (material.hasOwnProperty('name') && material.name !== materialData.name) {
if (!await nameCheck(material, res, next)) return;
}
if (material.hasOwnProperty('group')) {
material = await groupResolve(material, req, next);
if (!material) return;
}
if (material.hasOwnProperty('supplier')) {
material = await supplierResolve(material, req, next);
if (!material) return;
}
if (material.hasOwnProperty('properties')) {
if (!await propertiesCheck(material.properties, 'change', res, next,
materialData.properties.material_template.toString() !== material.properties.material_template)) return;
}
MaterialModel.findById(req.params.id).lean().exec(async (err, materialData: any) => {
if (!materialData) {
return res.status(404).json({status: 'Not found'});
}
if (materialData.status === 'deleted') {
return res.status(403).json({status: 'Forbidden'});
}
if (material.hasOwnProperty('name') && material.name !== materialData.name) {
if (!await nameCheck(material, res, next)) return;
}
if (material.hasOwnProperty('group')) {
material = await groupResolve(material, req, next);
if (!material) return;
}
if (material.hasOwnProperty('supplier')) {
material = await supplierResolve(material, req, next);
if (!material) return;
}
if (material.hasOwnProperty('properties')) {
if (!await propertiesCheck(material.properties, 'change', res, next,
materialData.properties.material_template.toString() !== material.properties.material_template)) return;
}
// check for changes
if (!_.isEqual(_.pick(IdValidate.stringify(materialData), _.keys(material)), IdValidate.stringify(material))) {
material.status = globals.status.new; // set status to new
}
// check for changes
if (!_.isEqual(_.pick(IdValidate.stringify(materialData), _.keys(material)), IdValidate.stringify(material))) {
material.status = globals.status.new; // set status to new
}
await MaterialModel.findByIdAndUpdate(req.params.id, material, {new: true})
.log(req).populate('group_id').populate('supplier_id').lean().exec((err, data) => {
if (err) return next(err);
res.json(MaterialValidate.output(data));
});
});
await MaterialModel.findByIdAndUpdate(req.params.id, material, {new: true})
.log(req).populate('group_id').populate('supplier_id').lean().exec((err, data) => {
if (err) return next(err);
res.json(MaterialValidate.output(data));
});
});
});
router.delete('/material/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
// check if there are still samples referencing this material
SampleModel.find({'material_id': new mongoose.Types.ObjectId(req.params.id), status: {$ne: globals.status.del}})
.lean().exec((err, data) => {
if (err) return next(err);
if (data.length) {
return res.status(400).json({status: 'Material still in use'});
}
MaterialModel.findByIdAndUpdate(req.params.id, {status: globals.status.del})
.log(req).populate('group_id').populate('supplier_id').lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'});
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
// check if there are still samples referencing this material
SampleModel.find({'material_id': new mongoose.Types.ObjectId(req.params.id), status: {$ne: globals.status.del}})
.lean().exec((err, data) => {
if (err) return next(err);
if (data.length) {
return res.status(400).json({status: 'Material still in use'});
}
MaterialModel.findByIdAndUpdate(req.params.id, {status: globals.status.del})
.log(req).populate('group_id').populate('supplier_id').lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'});
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
});
router.put('/material/restore/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
setStatus(globals.status.new, req, res, next);
setStatus(globals.status.new, req, res, next);
});
router.put('/material/validate/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
setStatus(globals.status.val, req, res, next);
setStatus(globals.status.val, req, res, next);
});
router.post('/material/new', async (req, res, next) => {
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
let {error, value: material} = MaterialValidate.input(req.body, 'new');
if (error) return res400(error, res);
let {error, value: material} = MaterialValidate.input(req.body, 'new');
if (error) return res400(error, res);
if (!await nameCheck(material, res, next)) return;
material = await groupResolve(material, req, next);
if (!material) return;
material = await supplierResolve(material, req, next);
if (!material) return;
if (!await propertiesCheck(material.properties, 'new', res, next)) return;
if (!await nameCheck(material, res, next)) return;
material = await groupResolve(material, req, next);
if (!material) return;
material = await supplierResolve(material, req, next);
if (!material) return;
if (!await propertiesCheck(material.properties, 'new', res, next)) return;
material.status = globals.status.new; // set status to new
await new MaterialModel(material).save(async (err, data) => {
if (err) return next(err);
db.log(req, 'materials', {_id: data._id}, data.toObject());
await data.populate('group_id').populate('supplier_id').execPopulate().catch(err => next(err));
if (data instanceof Error) return;
res.json(MaterialValidate.output(data.toObject()));
});
material.status = globals.status.new; // set status to new
await new MaterialModel(material).save(async (err, data) => {
if (err) return next(err);
db.log(req, 'materials', {_id: data._id}, data.toObject());
await data.populate('group_id').populate('supplier_id').execPopulate().catch(err => next(err));
if (data instanceof Error) return;
res.json(MaterialValidate.output(data.toObject()));
});
});
router.get('/material/groups', (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
MaterialGroupModel.find().lean().exec((err, data: any) => {
if (err) return next(err);
MaterialGroupModel.find().lean().exec((err, data: any) => {
if (err) return next(err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.outputGroups(e.name))));
});
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.outputGroups(e.name))));
});
});
router.get('/material/suppliers', (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
MaterialSupplierModel.find().lean().exec((err, data: any) => {
if (err) return next(err);
MaterialSupplierModel.find().lean().exec((err, data: any) => {
if (err) return next(err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.outputSuppliers(e.name))));
});
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => MaterialValidate.outputSuppliers(e.name))));
});
});
@ -189,81 +189,81 @@ module.exports = router;
async function nameCheck (material, res, next) { // check if name was already taken
const materialData = await MaterialModel.findOne({name: material.name}).lean().exec().catch(err => next(err)) as any;
if (materialData instanceof Error) return false;
if (materialData) { // could not find material_id
res.status(400).json({status: 'Material name already taken'});
return false;
}
return true;
const materialData = await MaterialModel.findOne({name: material.name}).lean().exec().catch(err => next(err)) as any;
if (materialData instanceof Error) return false;
if (materialData) { // could not find material_id
res.status(400).json({status: 'Material name already taken'});
return false;
}
return true;
}
async function groupResolve (material, req, next) {
const groupData = await MaterialGroupModel.findOneAndUpdate(
{name: material.group},
{name: material.group},
{upsert: true, new: true}
).log(req).lean().exec().catch(err => next(err)) as any;
if (groupData instanceof Error) return false;
material.group_id = groupData._id;
delete material.group;
return material;
const groupData = await MaterialGroupModel.findOneAndUpdate(
{name: material.group},
{name: material.group},
{upsert: true, new: true}
).log(req).lean().exec().catch(err => next(err)) as any;
if (groupData instanceof Error) return false;
material.group_id = groupData._id;
delete material.group;
return material;
}
async function supplierResolve (material, req, next) {
const supplierData = await MaterialSupplierModel.findOneAndUpdate(
{name: material.supplier},
{name: material.supplier},
{upsert: true, new: true}
).log(req).lean().exec().catch(err => next(err)) as any;
if (supplierData instanceof Error) return false;
material.supplier_id = supplierData._id;
delete material.supplier;
return material;
const supplierData = await MaterialSupplierModel.findOneAndUpdate(
{name: material.supplier},
{name: material.supplier},
{upsert: true, new: true}
).log(req).lean().exec().catch(err => next(err)) as any;
if (supplierData instanceof Error) return false;
material.supplier_id = supplierData._id;
delete material.supplier;
return material;
}
// validate material properties, returns false if invalid, otherwise template data
async function propertiesCheck (properties, param, res, next, checkVersion = true) {
if (!properties.material_template || !IdValidate.valid(properties.material_template)) { // template id not found
res.status(400).json({status: 'Material template not available'});
return false;
}
const materialData = await MaterialTemplateModel.findById(properties.material_template)
.lean().exec().catch(err => next(err)) as any;
if (materialData instanceof Error) return false;
if (!materialData) { // template not found
res.status(400).json({status: 'Material template not available'});
return false;
}
if (!properties.material_template || !IdValidate.valid(properties.material_template)) { // template id not found
res.status(400).json({status: 'Material template not available'});
return false;
}
const materialData = await MaterialTemplateModel.findById(properties.material_template)
.lean().exec().catch(err => next(err)) as any;
if (materialData instanceof Error) return false;
if (!materialData) { // template not found
res.status(400).json({status: 'Material template not available'});
return false;
}
if (checkVersion) {
// get all template versions and check if given is latest
const materialVersions = await MaterialTemplateModel.find({first_id: materialData.first_id}).sort({version: -1})
.lean().exec().catch(err => next(err)) as any;
if (materialVersions instanceof Error) return false;
if (properties.material_template !== materialVersions[0]._id.toString()) { // template not latest
res.status(400).json({status: 'Old template version not allowed'});
return false;
}
}
if (checkVersion) {
// get all template versions and check if given is latest
const materialVersions = await MaterialTemplateModel.find({first_id: materialData.first_id}).sort({version: -1})
.lean().exec().catch(err => next(err)) as any;
if (materialVersions instanceof Error) return false;
if (properties.material_template !== materialVersions[0]._id.toString()) { // template not latest
res.status(400).json({status: 'Old template version not allowed'});
return false;
}
}
// validate parameters
const {error, value} = ParametersValidate
.input(_.omit(properties, 'material_template'), materialData.parameters, param);
if (error) {res400(error, res); return false;}
Object.keys(value).forEach(key => {
properties[key] = value[key];
});
return materialData;
// validate parameters
const {error, value} = ParametersValidate
.input(_.omit(properties, 'material_template'), materialData.parameters, param);
if (error) {res400(error, res); return false;}
Object.keys(value).forEach(key => {
properties[key] = value[key];
});
return materialData;
}
function setStatus (status, req, res, next) { // set measurement status
MaterialModel.findByIdAndUpdate(req.params.id, {status: status}).log(req).lean().exec((err, data) => {
if (err) return next(err);
MaterialModel.findByIdAndUpdate(req.params.id, {status: status}).log(req).lean().exec((err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
}

1678
src/routes/measurement.spec.ts
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240
src/routes/measurement.ts
View File

@ -16,114 +16,114 @@ import mongoose from "mongoose";
const router = express.Router();
router.get('/measurement/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'all')) return;
MeasurementModel.findById(req.params.id).lean().exec((err, data: any) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
// deleted measurements only available for dev/admin
if (data.status === globals.status.del && !req.auth(res, ['dev', 'admin'], 'all')) return;
MeasurementModel.findById(req.params.id).lean().exec((err, data: any) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
// deleted measurements only available for dev/admin
if (data.status === globals.status.del && !req.auth(res, ['dev', 'admin'], 'all')) return;
res.json(MeasurementValidate.output(data, req));
});
res.json(MeasurementValidate.output(data, req));
});
});
router.put('/measurement/' + IdValidate.parameter(), async (req, res, next) => {
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
const {error, value: measurement} = MeasurementValidate.input(req.body, 'change');
if (error) return res400(error, res);
const {error, value: measurement} = MeasurementValidate.input(req.body, 'change');
if (error) return res400(error, res);
const data = await MeasurementModel.findById(req.params.id).lean().exec().catch(err => {next(err);}) as any;
if (data instanceof Error) return;
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (data.status === 'deleted') {
return res.status(403).json({status: 'Forbidden'});
}
const data = await MeasurementModel.findById(req.params.id).lean().exec().catch(err => {next(err);}) as any;
if (data instanceof Error) return;
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (data.status === 'deleted') {
return res.status(403).json({status: 'Forbidden'});
}
// add properties needed for sampleIdCheck
measurement.measurement_template = data.measurement_template;
measurement.sample_id = data.sample_id;
if (!await sampleIdCheck(measurement, req, res, next)) return;
// add properties needed for sampleIdCheck
measurement.measurement_template = data.measurement_template;
measurement.sample_id = data.sample_id;
if (!await sampleIdCheck(measurement, req, res, next)) return;
// check for changes
if (measurement.values) { // fill not changed values from database
measurement.values = _.assign({}, data.values, measurement.values);
if (!_.isEqual(measurement.values, data.values)) {
measurement.status = globals.status.new; // set status to new
}
}
// check for changes
if (measurement.values) { // fill not changed values from database
measurement.values = _.assign({}, data.values, measurement.values);
if (!_.isEqual(measurement.values, data.values)) {
measurement.status = globals.status.new; // set status to new
}
}
if (!await templateCheck(measurement, 'change', res, next)) return;
await MeasurementModel.findByIdAndUpdate(req.params.id, measurement, {new: true})
.log(req).lean().exec((err, data) => {
if (err) return next(err);
res.json(MeasurementValidate.output(data, req));
});
if (!await templateCheck(measurement, 'change', res, next)) return;
await MeasurementModel.findByIdAndUpdate(req.params.id, measurement, {new: true})
.log(req).lean().exec((err, data) => {
if (err) return next(err);
res.json(MeasurementValidate.output(data, req));
});
});
router.delete('/measurement/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
MeasurementModel.findById(req.params.id).lean().exec(async (err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (!await sampleIdCheck(data, req, res, next)) return;
await MeasurementModel.findByIdAndUpdate(req.params.id, {status: globals.status.del})
.log(req).lean().exec(err => {
if (err) return next(err);
return res.json({status: 'OK'});
});
});
MeasurementModel.findById(req.params.id).lean().exec(async (err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
if (!await sampleIdCheck(data, req, res, next)) return;
await MeasurementModel.findByIdAndUpdate(req.params.id, {status: globals.status.del})
.log(req).lean().exec(err => {
if (err) return next(err);
return res.json({status: 'OK'});
});
});
});
router.get('/measurement/sample/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
MeasurementModel.find({sample_id: mongoose.Types.ObjectId(req.params.id)}).lean().exec((err, data: any) => {
if (err) return next(err);
if (!data.length) {
return res.status(404).json({status: 'Not found'});
}
MeasurementModel.find({sample_id: mongoose.Types.ObjectId(req.params.id)}).lean().exec((err, data: any) => {
if (err) return next(err);
if (!data.length) {
return res.status(404).json({status: 'Not found'});
}
res.json(_.compact(data.map(e => MeasurementValidate.output(e, req, true))));
});
res.json(_.compact(data.map(e => MeasurementValidate.output(e, req, true))));
});
});
router.put('/measurement/restore/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
setStatus(globals.status.new, req, res, next);
setStatus(globals.status.new, req, res, next);
});
router.put('/measurement/validate/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
setStatus(globals.status.val, req, res, next);
setStatus(globals.status.val, req, res, next);
});
router.post('/measurement/new', async (req, res, next) => {
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['write', 'dev', 'admin'], 'basic')) return;
const {error, value: measurement} = MeasurementValidate.input(req.body, 'new');
if (error) return res400(error, res);
const {error, value: measurement} = MeasurementValidate.input(req.body, 'new');
if (error) return res400(error, res);
if (!await sampleIdCheck(measurement, req, res, next)) return;
measurement.values = await templateCheck(measurement, 'new', res, next);
if (!measurement.values) return;
if (!await sampleIdCheck(measurement, req, res, next)) return;
measurement.values = await templateCheck(measurement, 'new', res, next);
if (!measurement.values) return;
measurement.status = globals.status.new;
await new MeasurementModel(measurement).save((err, data) => {
if (err) return next(err);
db.log(req, 'measurements', {_id: data._id}, data.toObject());
res.json(MeasurementValidate.output(data.toObject(), req));
});
measurement.status = globals.status.new;
await new MeasurementModel(measurement).save((err, data) => {
if (err) return next(err);
db.log(req, 'measurements', {_id: data._id}, data.toObject());
res.json(MeasurementValidate.output(data.toObject(), req));
});
});
@ -132,61 +132,61 @@ module.exports = router;
// validate sample_id, returns false if invalid or user has no access for this sample
async function sampleIdCheck (measurement, req, res, next) {
const sampleData = await SampleModel.findById(measurement.sample_id)
.lean().exec().catch(err => {next(err); return false;}) as any;
if (!sampleData) { // sample_id not found
res.status(400).json({status: 'Sample id not available'});
return false
}
// sample does not belong to user
return !(sampleData.user_id.toString() !== req.authDetails.id && !req.auth(res, ['dev', 'admin'], 'basic'));
const sampleData = await SampleModel.findById(measurement.sample_id)
.lean().exec().catch(err => {next(err); return false;}) as any;
if (!sampleData) { // sample_id not found
res.status(400).json({status: 'Sample id not available'});
return false
}
// sample does not belong to user
return !(sampleData.user_id.toString() !== req.authDetails.id && !req.auth(res, ['dev', 'admin'], 'basic'));
}
// validate measurement_template and values, returns values, true if values are {} or false if invalid,
// param for 'new'/'change'
async function templateCheck (measurement, param, res, next) {
const templateData = await MeasurementTemplateModel.findById(measurement.measurement_template)
.lean().exec().catch(err => {next(err); return false;}) as any;
if (!templateData) { // template not found
res.status(400).json({status: 'Measurement template not available'});
return false
}
const templateData = await MeasurementTemplateModel.findById(measurement.measurement_template)
.lean().exec().catch(err => {next(err); return false;}) as any;
if (!templateData) { // template not found
res.status(400).json({status: 'Measurement template not available'});
return false
}
// fill not given values for new measurements
if (param === 'new') {
// get all template versions and check if given is latest
const templateVersions = await MeasurementTemplateModel.find({first_id: templateData.first_id}).sort({version: -1})
.lean().exec().catch(err => next(err)) as any;
if (templateVersions instanceof Error) return false;
if (measurement.measurement_template !== templateVersions[0]._id.toString()) { // template not latest
res.status(400).json({status: 'Old template version not allowed'});
return false;
}
// fill not given values for new measurements
if (param === 'new') {
// get all template versions and check if given is latest
const templateVersions = await MeasurementTemplateModel.find({first_id: templateData.first_id}).sort({version: -1})
.lean().exec().catch(err => next(err)) as any;
if (templateVersions instanceof Error) return false;
if (measurement.measurement_template !== templateVersions[0]._id.toString()) { // template not latest
res.status(400).json({status: 'Old template version not allowed'});
return false;
}
if (Object.keys(measurement.values).length === 0) {
res.status(400).json({status: 'At least one value is required'});
return false
}
const fillValues = {}; // initialize not given values with null
templateData.parameters.forEach(parameter => {
fillValues[parameter.name] = null;
});
measurement.values = _.assign({}, fillValues, measurement.values);
}
if (Object.keys(measurement.values).length === 0) {
res.status(400).json({status: 'At least one value is required'});
return false
}
const fillValues = {}; // initialize not given values with null
templateData.parameters.forEach(parameter => {
fillValues[parameter.name] = null;
});
measurement.values = _.assign({}, fillValues, measurement.values);
}
// validate values
const {error, value} = ParametersValidate.input(measurement.values, templateData.parameters, 'null');
if (error) {res400(error, res); return false;}
return value || true;
// validate values
const {error, value} = ParametersValidate.input(measurement.values, templateData.parameters, 'null');
if (error) {res400(error, res); return false;}
return value || true;
}
function setStatus (status, req, res, next) { // set measurement status
MeasurementModel.findByIdAndUpdate(req.params.id, {status: status}).log(req).lean().exec((err, data) => {
if (err) return next(err);
MeasurementModel.findByIdAndUpdate(req.params.id, {status: status}).log(req).lean().exec((err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
}

1060
src/routes/model.spec.ts
View File

File diff suppressed because it is too large Load Diff

246
src/routes/model.ts
View File

@ -13,162 +13,162 @@ import mongoose from "mongoose";
const router = express.Router();
router.get('/model/groups', (req, res, next) => {
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
let conditions: any = [{}, {}];
if (['dev', 'admin'].indexOf(req.authDetails.level) < 0) { // if not dev or admin, user has to possess model rights
conditions = [
{'models._id': {$in: req.authDetails.models.map(e => mongoose.Types.ObjectId(e))}},
{group: true, 'models.$': true}
]
}
ModelModel.find(...conditions).lean().exec((err, data) => {
if (err) return next(err);
let conditions: any = [{}, {}];
if (['dev', 'admin'].indexOf(req.authDetails.level) < 0) { // if not dev or admin, user has to possess model rights
conditions = [
{'models._id': {$in: req.authDetails.models.map(e => mongoose.Types.ObjectId(e))}},
{group: true, 'models.$': true}
]
}
ModelModel.find(...conditions).lean().exec((err, data) => {
if (err) return next(err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => ModelValidate.output(e))));
});
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => ModelValidate.output(e))));
});
});
router.post('/model/:group', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error, value: model} = ModelValidate.input(req.body);
if (error) return res400(error, res);
const {error, value: model} = ModelValidate.input(req.body);
if (error) return res400(error, res);
ModelModel.findOne({group: req.params.group}).lean().exec((err, data) => {
if (err) return next(err);
ModelModel.findOne({group: req.params.group}).lean().exec((err, data) => {
if (err) return next(err);
if (data) { // group exists
if (data.models.find(e => e.name === model.name)) { // name exists, overwrite
ModelModel.findOneAndUpdate(
{$and: [{group: req.params.group}, {'models.name': model.name}]},
{'models.$': model},
{upsert: true}).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'})
});
}
else { // create new
ModelModel.findOneAndUpdate(
{group: req.params.group},
{$push: {models: model as never}}
).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'});
});
}
}
else { // create new group
new ModelModel({group: req.params.group, models: [model]}).save((err, data) => {
if (err) return next(err);
db.log(req, 'models', {_id: data._id}, data.toObject());
res.json({status: 'OK'});
});
}
});
if (data) { // group exists
if (data.models.find(e => e.name === model.name)) { // name exists, overwrite
ModelModel.findOneAndUpdate(
{$and: [{group: req.params.group}, {'models.name': model.name}]},
{'models.$': model},
{upsert: true}).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'})
});
}
else { // create new
ModelModel.findOneAndUpdate(
{group: req.params.group},
{$push: {models: model as never}}
).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'});
});
}
}
else { // create new group
new ModelModel({group: req.params.group, models: [model]}).save((err, data) => {
if (err) return next(err);
db.log(req, 'models', {_id: data._id}, data.toObject());
res.json({status: 'OK'});
});
}
});
});
router.delete('/model/:group(((?!file)[^\\/]+?))/:name', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
ModelModel.findOne({group: req.params.group}).lean().exec((err, data) => {
if (err) return next(err);
ModelModel.findOne({group: req.params.group}).lean().exec((err, data) => {
if (err) return next(err);
if (!data || !data.models.find(e => e.name === req.params.name)) {
return res.status(404).json({status: 'Not found'});
}
// delete all references in user.models
UserModel.updateMany({}, {$pull: {models: data.models.find(e => e.name === req.params.name)._id as never}},
{ multi: true }).log(req).lean().exec(err => {
if (err) return next(err);
if (data.models.length > 1) { // only remove model
ModelModel.findOneAndUpdate(
{group: req.params.group},
{$pull: {models: data.models.find(e => e.name === req.params.name) as never}}
).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'})
});
}
else { // remove document
ModelModel.findOneAndDelete({group: req.params.group}).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'})
});
}
});
});
if (!data || !data.models.find(e => e.name === req.params.name)) {
return res.status(404).json({status: 'Not found'});
}
// delete all references in user.models
UserModel.updateMany({}, {$pull: {models: data.models.find(e => e.name === req.params.name)._id as never}},
{ multi: true }).log(req).lean().exec(err => {
if (err) return next(err);
if (data.models.length > 1) { // only remove model
ModelModel.findOneAndUpdate(
{group: req.params.group},
{$pull: {models: data.models.find(e => e.name === req.params.name) as never}}
).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'})
});
}
else { // remove document
ModelModel.findOneAndDelete({group: req.params.group}).log(req).lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'})
});
}
});
});
});
router.get('/model/files', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
ModelFileModel.find().exec((err, data) => {
if (err) return next(err);
res.json(data.map(e => ModelValidate.fileOutput(e)));
});
ModelFileModel.find().exec((err, data) => {
if (err) return next(err);
res.json(data.map(e => ModelValidate.fileOutput(e)));
});
});
router.get('/model/file/:name', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'all')) return;
if (!req.auth(res, ['dev', 'admin'], 'all')) return;
ModelFileModel.findOne({name: req.params.name}).lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.set('Content-Type', 'application/octet-stream');
res.send(data.data.buffer);
}
else {
res.status(404).json({status: 'Not found'});
}
});
ModelFileModel.findOne({name: req.params.name}).lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.set('Content-Type', 'application/octet-stream');
res.send(data.data.buffer);
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
router.post('/model/file/:name', bodyParser.raw({limit: '50mb'}), (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'all')) return;
if (!req.auth(res, ['dev', 'admin'], 'all')) return;
ModelFileModel.replaceOne({name: req.params.name}, {name: req.params.name, data: req.body}).setOptions({upsert: true})
.lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'});
});
ModelFileModel.replaceOne({name: req.params.name}, {name: req.params.name, data: req.body}).setOptions({upsert: true})
.lean().exec(err => {
if (err) return next(err);
res.json({status: 'OK'});
});
});
router.delete('/model/file/:name', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
ModelFileModel.findOneAndDelete({name: req.params.name}).lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'});
}
else {
res.status(404).json({status: 'Not found'});
}
});
ModelFileModel.findOneAndDelete({name: req.params.name}).lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'});
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
router.get('/model/authorized/:url', (req, res, next) => {
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
if (['dev', 'admin'].indexOf(req.authDetails.level) < 0) { // if not dev or admin, user has to possess model rights
ModelModel.findOne({models: { $elemMatch: {
url: decodeURIComponent(req.params.url),
'_id': {$in: req.authDetails.models.map(e => mongoose.Types.ObjectId(e))}
}}}).lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'});
}
else {
res.status(403).json({status: 'Forbidden'});
}
});
}
else {
res.json({status: 'OK'});
}
if (['dev', 'admin'].indexOf(req.authDetails.level) < 0) { // if not dev or admin, user has to possess model rights
ModelModel.findOne({models: { $elemMatch: {
url: decodeURIComponent(req.params.url),
'_id': {$in: req.authDetails.models.map(e => mongoose.Types.ObjectId(e))}
}}}).lean().exec((err, data) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'});
}
else {
res.status(403).json({status: 'Forbidden'});
}
});
}
else {
res.json({status: 'OK'});
}
});
module.exports = router;

474
src/routes/root.spec.ts
View File

@ -4,254 +4,254 @@ import db from '../db';
describe('/', () => {
let server;
before(done => TestHelper.before(done));
beforeEach(done => server = TestHelper.beforeEach(server, done));
afterEach(done => TestHelper.afterEach(server, done));
after(done => TestHelper.after(done));
let server;
before(done => TestHelper.before(done));
beforeEach(done => server = TestHelper.beforeEach(server, done));
afterEach(done => TestHelper.afterEach(server, done));
after(done => TestHelper.after(done));
describe('GET /', () => {
it('returns the root message', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/',
httpStatus: 200,
res: {status: 'API server up and running!'}
});
});
});
describe('GET /', () => {
it('returns the root message', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/',
httpStatus: 200,
res: {status: 'API server up and running!'}
});
});
});
describe('GET /changelog/{timestamp}/{page}/{pagesize}', () => {
it('returns the first page', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/0/2',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).have.lengthOf(2);
should(res.body[0].date).be.eql('1979-07-28T06:04:51.000Z');
should(res.body[1].date).be.eql('1979-07-28T06:04:50.000Z');
should(res.body).matchEach(log => {
should(log).have.only.keys('_id', 'date', 'action', 'collection', 'conditions', 'data');
should(log).have.property('_id').be.type('string');
should(log).have.property('action', 'PUT /sample/400000000000000000000001');
should(log).have.property('collection', 'samples');
should(log).have.property('conditions', {_id: '400000000000000000000001'});
should(log).have.property('data', {type: 'processed', status: 0});
});
done();
});
});
it('returns another page', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/1/2',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).have.lengthOf(1);
should(res.body[0].date).be.eql('1979-07-28T06:04:49.000Z');
should(res.body).matchEach(log => {
should(log).have.only.keys('_id', 'date', 'action', 'collection', 'conditions', 'data');
should(log).have.property('_id').be.type('string');
should(log).have.property('action', 'PUT /sample/400000000000000000000001');
should(log).have.property('collection', 'samples');
should(log).have.property('conditions', {_id: '400000000000000000000001'});
should(log).have.property('data', {type: 'processed', status: 0});
done();
});
});
});
it('returns an empty array for a page with no results', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).have.lengthOf(0);
done();
});
});
it('rejects invalid ids', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/12000003000000h000000000/10/2',
auth: {basic: 'admin'},
httpStatus: 400,
res: {status: 'Invalid body format', details: 'Invalid object id'}
});
});
it('rejects negative page numbers', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/-10/2',
auth: {basic: 'admin'},
httpStatus: 400,
res: {status: 'Invalid body format', details: '"page" must be greater than or equal to 0'}
});
});
it('rejects negative pagesizes', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/-2',
auth: {basic: 'admin'},
httpStatus: 400,
res: {status: 'Invalid body format', details: '"pagesize" must be greater than or equal to 0'}
});
});
it('rejects request from a write user', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
auth: {basic: 'janedoe'},
httpStatus: 403
});
});
it('rejects requests from an API key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
auth: {key: 'admin'},
httpStatus: 401
});
});
it('rejects unauthorized requests', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
httpStatus: 401
});
});
});
describe('GET /changelog/{timestamp}/{page}/{pagesize}', () => {
it('returns the first page', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/0/2',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).have.lengthOf(2);
should(res.body[0].date).be.eql('1979-07-28T06:04:51.000Z');
should(res.body[1].date).be.eql('1979-07-28T06:04:50.000Z');
should(res.body).matchEach(log => {
should(log).have.only.keys('_id', 'date', 'action', 'collection', 'conditions', 'data');
should(log).have.property('_id').be.type('string');
should(log).have.property('action', 'PUT /sample/400000000000000000000001');
should(log).have.property('collection', 'samples');
should(log).have.property('conditions', {_id: '400000000000000000000001'});
should(log).have.property('data', {type: 'processed', status: 0});
});
done();
});
});
it('returns another page', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/1/2',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).have.lengthOf(1);
should(res.body[0].date).be.eql('1979-07-28T06:04:49.000Z');
should(res.body).matchEach(log => {
should(log).have.only.keys('_id', 'date', 'action', 'collection', 'conditions', 'data');
should(log).have.property('_id').be.type('string');
should(log).have.property('action', 'PUT /sample/400000000000000000000001');
should(log).have.property('collection', 'samples');
should(log).have.property('conditions', {_id: '400000000000000000000001'});
should(log).have.property('data', {type: 'processed', status: 0});
done();
});
});
});
it('returns an empty array for a page with no results', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
auth: {basic: 'admin'},
httpStatus: 200
}).end((err, res) => {
if (err) return done(err);
should(res.body).have.lengthOf(0);
done();
});
});
it('rejects invalid ids', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/12000003000000h000000000/10/2',
auth: {basic: 'admin'},
httpStatus: 400,
res: {status: 'Invalid body format', details: 'Invalid object id'}
});
});
it('rejects negative page numbers', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/-10/2',
auth: {basic: 'admin'},
httpStatus: 400,
res: {status: 'Invalid body format', details: '"page" must be greater than or equal to 0'}
});
});
it('rejects negative pagesizes', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/-2',
auth: {basic: 'admin'},
httpStatus: 400,
res: {status: 'Invalid body format', details: '"pagesize" must be greater than or equal to 0'}
});
});
it('rejects request from a write user', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
auth: {basic: 'janedoe'},
httpStatus: 403
});
});
it('rejects requests from an API key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
auth: {key: 'admin'},
httpStatus: 401
});
});
it('rejects unauthorized requests', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/changelog/120000030000000000000000/10/2',
httpStatus: 401
});
});
});
describe('Unknown routes', () => {
it('return a 404 message', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/unknownroute',
httpStatus: 404
});
});
});
describe('Unknown routes', () => {
it('return a 404 message', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/unknownroute',
httpStatus: 404
});
});
});
describe('An unauthorized request', () => {
it('returns a 401 message', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
httpStatus: 401
});
});
it('does not work with correct username', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: {name: 'admin', pass: 'Abc123!!'}},
httpStatus: 401
});
});
it('does not work with incorrect username', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: {name: 'adminxx', pass: 'Abc123!!'}},
httpStatus: 401
});
});
it('does not work with a deleted user', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: {name: 'customerold', pass: 'Xyz890*)'}},
httpStatus: 401
});
});
});
describe('An unauthorized request', () => {
it('returns a 401 message', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
httpStatus: 401
});
});
it('does not work with correct username', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: {name: 'admin', pass: 'Abc123!!'}},
httpStatus: 401
});
});
it('does not work with incorrect username', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: {name: 'adminxx', pass: 'Abc123!!'}},
httpStatus: 401
});
});
it('does not work with a deleted user', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: {name: 'customerold', pass: 'Xyz890*)'}},
httpStatus: 401
});
});
});
describe('An authorized request', () => {
it('works with an API key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {key: 'admin'},
httpStatus: 200,
res: {status: 'Authorization successful', method: 'key', level: 'admin', user_id: '000000000000000000000003'}
});
});
it('works with basic auth', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: 'admin'},
httpStatus: 200,
res: {status: 'Authorization successful', method: 'basic', level: 'admin', user_id: '000000000000000000000003'}
});
});
});
describe('An authorized request', () => {
it('works with an API key', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {key: 'admin'},
httpStatus: 200,
res: {status: 'Authorization successful', method: 'key', level: 'admin', user_id: '000000000000000000000003'}
});
});
it('works with basic auth', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/authorized',
auth: {basic: 'admin'},
httpStatus: 200,
res: {status: 'Authorization successful', method: 'basic', level: 'admin', user_id: '000000000000000000000003'}
});
});
});
describe('An invalid JSON body', () => {
it('is rejected', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/',
httpStatus: 400,
reqType: 'json',
req: '{"xxx"}',
res: {status: 'Invalid JSON body'}
});
describe('An invalid JSON body', () => {
it('is rejected', done => {
TestHelper.request(server, done, {
method: 'post',
url: '/',
httpStatus: 400,
reqType: 'json',
req: '{"xxx"}',
res: {status: 'Invalid JSON body'}
});
});
});
});
});
// describe('A not connected database', () => { // RUN AS LAST OR RECONNECT DATABASE!!
// it('resolves to an 500 error', done => {
// db.disconnect(() => {
// TestHelper.request(server, done, {
// method: 'get',
// url: '/',
// httpStatus: 500
// });
// });
// });
// });
// describe('A not connected database', () => { // RUN AS LAST OR RECONNECT DATABASE!!
// it('resolves to an 500 error', done => {
// db.disconnect(() => {
// TestHelper.request(server, done, {
// method: 'get',
// url: '/',
// httpStatus: 500
// });
// });
// });
// });
});
describe('The /api/{url} redirect', () => {
let server;
let counter = 0; // count number of current test method
before(done => {
process.env.port = '2999';
db.connect('test', done);
});
beforeEach(done => {
process.env.NODE_ENV = counter === 1 ? 'production' : 'test';
counter ++;
server = TestHelper.beforeEach(server, done);
});
afterEach(done => TestHelper.afterEach(server, done));
after(done => TestHelper.after(done));
let server;
let counter = 0; // count number of current test method
before(done => {
process.env.port = '2999';
db.connect('test', done);
});
beforeEach(done => {
process.env.NODE_ENV = counter === 1 ? 'production' : 'test';
counter ++;
server = TestHelper.beforeEach(server, done);
});
afterEach(done => TestHelper.afterEach(server, done));
after(done => TestHelper.after(done));
it('returns the right method', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/api/authorized',
auth: {basic: 'admin'},
httpStatus: 200,
res: {status: 'Authorization successful', method: 'basic', level: 'admin', user_id: '000000000000000000000003'}
});
});
// it('is disabled in production', done => {
// TestHelper.request(server, done, {
// method: 'get',
// url: '/api/authorized',
// auth: {basic: 'admin'},
// httpStatus: 404
// });
// });
it('returns the right method', done => {
TestHelper.request(server, done, {
method: 'get',
url: '/api/authorized',
auth: {basic: 'admin'},
httpStatus: 200,
res: {status: 'Authorization successful', method: 'basic', level: 'admin', user_id: '000000000000000000000003'}
});
});
// it('is disabled in production', done => {
// TestHelper.request(server, done, {
// method: 'get',
// url: '/api/authorized',
// auth: {basic: 'admin'},
// httpStatus: 404
// });
// });
});

44
src/routes/root.ts
View File

@ -9,37 +9,37 @@ import _ from 'lodash';
const router = express.Router();
router.get('/', (req, res) => {
res.json({status: 'API server up and running!'});
res.json({status: 'API server up and running!'});
});
router.get('/authorized', (req, res) => {
if (!req.auth(res, Object.values(globals.levels))) return;
res.json({
status: 'Authorization successful',
method: req.authDetails.method,
level: req.authDetails.level,
user_id: req.authDetails.id
});
if (!req.auth(res, Object.values(globals.levels))) return;
res.json({
status: 'Authorization successful',
method: req.authDetails.method,
level: req.authDetails.level,
user_id: req.authDetails.id
});
});
router.get('/changelog/:id/:page?/:pagesize?', (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error, value: options} = RootValidate.changelogParams({
id: req.params.id,
page: req.params.page,
pagesize: req.params.pagesize
});
if (error) return res400(error, res);
const {error, value: options} = RootValidate.changelogParams({
id: req.params.id,
page: req.params.page,
pagesize: req.params.pagesize
});
if (error) return res400(error, res);
ChangelogModel.find({_id: {$lte: mongoose.Types.ObjectId(options.id)}})
.sort({_id: -1}).skip(options.page * options.pagesize).limit(options.pagesize)
.lean().exec((err, data) => {
if (err) return next(err);
ChangelogModel.find({_id: {$lte: mongoose.Types.ObjectId(options.id)}})
.sort({_id: -1}).skip(options.page * options.pagesize).limit(options.pagesize)
.lean().exec((err, data) => {
if (err) return next(err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => RootValidate.changelogOutput(e))));
});
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => RootValidate.changelogOutput(e))));
});
});
module.exports = router;

4540
src/routes/sample.spec.ts
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src/routes/sample.ts
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1286
src/routes/template.spec.ts
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238
src/routes/template.ts
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@ -18,141 +18,141 @@ import db from '../db';
const router = express.Router();
router.get('/template/:collection(measurements|conditions|materials)', (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'basic')) return;
req.params.collection = req.params.collection.replace(/s$/g, ''); // remove trailing s
model(req).find({}).lean().exec((err, data) => {
if (err) next (err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => TemplateValidate.output(e))));
});
req.params.collection = req.params.collection.replace(/s$/g, ''); // remove trailing s
model(req).find({}).lean().exec((err, data) => {
if (err) next (err);
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => TemplateValidate.output(e))));
});
});
router.get('/template/:collection(measurement|condition|material)/' + IdValidate.parameter(), (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'basic')) return;
model(req).findById(req.params.id).lean().exec((err, data) => {
if (err) next (err);
if (data) {
res.json(TemplateValidate.output(data));
}
else {
res.status(404).json({status: 'Not found'});
}
});
model(req).findById(req.params.id).lean().exec((err, data) => {
if (err) next (err);
if (data) {
res.json(TemplateValidate.output(data));
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
router.put('/template/:collection(measurement|condition|material)/' + IdValidate.parameter(),
async (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
async (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error, value: template} = TemplateValidate.input(req.body, 'change');
if (error) return res400(error, res);
const {error, value: template} = TemplateValidate.input(req.body, 'change');
if (error) return res400(error, res);
// find given template
const templateRef = await model(req).findById(req.params.id).lean().exec().catch(err => {next(err);}) as any;
if (templateRef instanceof Error) return;
if (!templateRef) {
return res.status(404).json({status: 'Not found'});
}
// find latest version
const templateData = await model(req).findOne({first_id: templateRef.first_id}).sort({version: -1})
.lean().exec().catch(err => {next(err);}) as any;
if (templateData instanceof Error) return;
if (!templateData) {
return res.status(404).json({status: 'Not found'});
}
// find given template
const templateRef = await model(req).findById(req.params.id).lean().exec().catch(err => {next(err);}) as any;
if (templateRef instanceof Error) return;
if (!templateRef) {
return res.status(404).json({status: 'Not found'});
}
// find latest version
const templateData = await model(req).findOne({first_id: templateRef.first_id}).sort({version: -1})
.lean().exec().catch(err => {next(err);}) as any;
if (templateData instanceof Error) return;
if (!templateData) {
return res.status(404).json({status: 'Not found'});
}
if (!_.isEqual(_.pick(templateData, _.keys(template)), template)) { // data was changed
if (!template.parameters || _.isEqual(templateData.parameters, template.parameters)) { // only name was changed
model(req).findByIdAndUpdate(req.params.id, {name: template.name}, {new: true})
.log(req).lean().exec((err, data) => {
if (err) next (err);
res.json(TemplateValidate.output(data));
});
}
else if (template.parameters.filter((e, i) => _.isEqual(e.range, templateData.parameters[i].range)).length
=== templateData.parameters.length) { // only names changed
const changedParameterNames = template.parameters.map((e, i) => ( // list of new names
{name: e.name, index: i, oldName: templateData.parameters[i].name}
)).filter(e => e.name !== e.oldName);
if (!_.isEqual(_.pick(templateData, _.keys(template)), template)) { // data was changed
if (!template.parameters || _.isEqual(templateData.parameters, template.parameters)) { // only name was changed
model(req).findByIdAndUpdate(req.params.id, {name: template.name}, {new: true})
.log(req).lean().exec((err, data) => {
if (err) next (err);
res.json(TemplateValidate.output(data));
});
}
else if (template.parameters.filter((e, i) => _.isEqual(e.range, templateData.parameters[i].range)).length
=== templateData.parameters.length) { // only names changed
const changedParameterNames = template.parameters.map((e, i) => ( // list of new names
{name: e.name, index: i, oldName: templateData.parameters[i].name}
)).filter(e => e.name !== e.oldName);
// custom mappings for different collections
let targetModel; // model of the collection where the template is used
let pathPrefix; // path to the parameters in use
let templatePath; // complete path of the template property
switch (req.params.collection) {
case 'condition':
targetModel = SampleModel;
pathPrefix = 'condition.';
templatePath = 'condition.condition_template';
break;
case 'measurement':
targetModel = MeasurementModel;
pathPrefix = 'values.';
templatePath = 'measurement_template';
break;
case 'material':
targetModel = MaterialModel;
pathPrefix = 'properties.';
templatePath = 'properties.material_template';
break;
}
// custom mappings for different collections
let targetModel; // model of the collection where the template is used
let pathPrefix; // path to the parameters in use
let templatePath; // complete path of the template property
switch (req.params.collection) {
case 'condition':
targetModel = SampleModel;
pathPrefix = 'condition.';
templatePath = 'condition.condition_template';
break;
case 'measurement':
targetModel = MeasurementModel;
pathPrefix = 'values.';
templatePath = 'measurement_template';
break;
case 'material':
targetModel = MaterialModel;
pathPrefix = 'properties.';
templatePath = 'properties.material_template';
break;
}
targetModel.updateMany({[templatePath]: mongoose.Types.ObjectId(templateData._id)},
{$rename:
changedParameterNames.reduce((s, e) => {s[pathPrefix + e.oldName] = pathPrefix + e.name; return s;}, {})
}) .log(req).lean().exec(err => {
if (err) return next(err);
model(req).findByIdAndUpdate(req.params.id,
{$set:
changedParameterNames.reduce(
(s, e) => {s[`parameters.${e.index}.name`] = e.name; return s;}, {name: template.name}
),
},{new: true}).log(req).lean().exec((err, data) => {
if (err) next (err);
res.json(TemplateValidate.output(data));
});
});
}
else {
template.version = templateData.version + 1; // increase version
// save new template, fill with old properties
await new (model(req))(_.assign({}, _.omit(templateData, ['_id', '__v']), template)).save((err, data) => {
if (err) next (err);
db.log(req, req.params.collection + '_templates', {_id: data._id}, data.toObject());
res.json(TemplateValidate.output(data.toObject()));
});
}
}
else {
res.json(TemplateValidate.output(templateData));
}
});
targetModel.updateMany({[templatePath]: mongoose.Types.ObjectId(templateData._id)},
{$rename:
changedParameterNames.reduce((s, e) => {s[pathPrefix + e.oldName] = pathPrefix + e.name; return s;}, {})
}) .log(req).lean().exec(err => {
if (err) return next(err);
model(req).findByIdAndUpdate(req.params.id,
{$set:
changedParameterNames.reduce(
(s, e) => {s[`parameters.${e.index}.name`] = e.name; return s;}, {name: template.name}
),
},{new: true}).log(req).lean().exec((err, data) => {
if (err) next (err);
res.json(TemplateValidate.output(data));
});
});
}
else {
template.version = templateData.version + 1; // increase version
// save new template, fill with old properties
await new (model(req))(_.assign({}, _.omit(templateData, ['_id', '__v']), template)).save((err, data) => {
if (err) next (err);
db.log(req, req.params.collection + '_templates', {_id: data._id}, data.toObject());
res.json(TemplateValidate.output(data.toObject()));
});
}
}
else {
res.json(TemplateValidate.output(templateData));
}
});
router.post('/template/:collection(measurement|condition|material)/new', async (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
router.post('/template/:collection(measurement|condition|material)/new', async (req, res, next) => {
if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
const {error, value: template} = TemplateValidate.input(req.body, 'new');
if (error) return res400(error, res);
const {error, value: template} = TemplateValidate.input(req.body, 'new');
if (error) return res400(error, res);
template._id = mongoose.Types.ObjectId(); // set reference to itself for first version of template
template.first_id = template._id;
template.version = 1; // set template version
await new (model(req))(template).save((err, data) => {
if (err) next (err);
db.log(req, req.params.collection + '_templates', {_id: data._id}, data.toObject());
res.json(TemplateValidate.output(data.toObject()));
});
});
template._id = mongoose.Types.ObjectId(); // set reference to itself for first version of template
template.first_id = template._id;
template.version = 1; // set template version
await new (model(req))(template).save((err, data) => {
if (err) next (err);
db.log(req, req.params.collection + '_templates', {_id: data._id}, data.toObject());
res.json(TemplateValidate.output(data.toObject()));
});
});
module.exports = router;
module.exports = router;
function model (req) { // return right template model
switch (req.params.collection) {
case 'condition': return ConditionTemplateModel
case 'measurement': return MeasurementTemplateModel
case 'material': return MaterialTemplateModel
}
}
function model (req) { // return right template model
switch (req.params.collection) {
case 'condition': return ConditionTemplateModel
case 'measurement': return MeasurementTemplateModel
case 'material': return MaterialTemplateModel
}
}

1560
src/routes/user.spec.ts
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290
src/routes/user.ts
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@ -15,206 +15,206 @@ const router = express.Router();
router.get('/users', (req, res) => {
if (!req.auth(res, ['admin'], 'basic')) return;
if (!req.auth(res, ['admin'], 'basic')) return;
UserModel.find({}).lean().exec( (err, data:any) => {
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => UserValidate.output(e, 'admin'))));
});
UserModel.find({}).lean().exec( (err, data:any) => {
// validate all and filter null values from validation errors
res.json(_.compact(data.map(e => UserValidate.output(e, 'admin'))));
});
});
// this path matches /user, /user/ and /user/xxx, but not /user/key or user/new.
// See https://forbeslindesay.github.io/express-route-tester/ for the generated regex
router.get('/user:username([/](?!key|new).?*|/?)', (req, res, next) => {
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
const username = getUsername(req, res);
if (!username) return;
UserModel.findOne({name: username}).lean().exec( (err, data:any) => {
if (err) return next(err);
if (data) {
res.json(UserValidate.output(data)); // validate all and filter null values from validation errors
}
else {
res.status(404).json({status: 'Not found'});
}
});
const username = getUsername(req, res);
if (!username) return;
UserModel.findOne({name: username}).lean().exec( (err, data:any) => {
if (err) return next(err);
if (data) {
res.json(UserValidate.output(data)); // validate all and filter null values from validation errors
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
// this path matches /user, /user/ and /user/xxx, but not /user/key or user/new
router.put('/user:username([/](?!key|new|restore).?*|/?)', async (req, res, next) => {
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
const username = getUsername(req, res);
if (!username) return;
const username = getUsername(req, res);
if (!username) return;
const {error, value: user} = UserValidate.input(req.body, 'change' +
(req.authDetails.level === 'admin'? 'admin' : ''));
if (error) return res400(error, res);
const {error, value: user} = UserValidate.input(req.body, 'change' +
(req.authDetails.level === 'admin'? 'admin' : ''));
if (error) return res400(error, res);
if (user.hasOwnProperty('pass')) {
user.pass = bcrypt.hashSync(user.pass, 10);
}
if (user.hasOwnProperty('pass')) {
user.pass = bcrypt.hashSync(user.pass, 10);
}
// check that user does not already exist if new name was specified
if (user.hasOwnProperty('name') && user.name !== username) {
if (!await usernameCheck(user.name, res, next)) return;
}
// check that user does not already exist if new name was specified
if (user.hasOwnProperty('name') && user.name !== username) {
if (!await usernameCheck(user.name, res, next)) return;
}
if (user.hasOwnProperty('models')) {
if (!await modelsCheck(user.models, res, next)) return;
}
if (user.hasOwnProperty('models')) {
if (!await modelsCheck(user.models, res, next)) return;
}
// get current mail address to compare to given address
const oldUserData = await UserModel.findOne({name: username}).lean().exec().catch(err => next(err));
// get current mail address to compare to given address
const oldUserData = await UserModel.findOne({name: username}).lean().exec().catch(err => next(err));
await UserModel.findOneAndUpdate({name: username}, user, {new: true}).log(req).lean().exec( (err, data:any) => {
if (err) return next(err);
if (data) {
if (data.email !== oldUserData.email) { // mail address was changed, send notice to old address
Mail.send(oldUserData.email, 'Email change in your DeFinMa database account',
'Hi, <br><br> Your email address of your DeFinMa account was changed to ' + data.mail +
'<br><br>If you actually did this, just delete this email.' +
'<br><br>If you did not change your email, someone might be messing around with your account, ' +
'so talk to the sysadmin quickly!<br><br>Have a nice day.' +
'<br><br>The DeFinMa team');
}
res.json(UserValidate.output(data));
}
else {
res.status(404).json({status: 'Not found'});
}
});
await UserModel.findOneAndUpdate({name: username}, user, {new: true}).log(req).lean().exec( (err, data:any) => {
if (err) return next(err);
if (data) {
if (data.email !== oldUserData.email) { // mail address was changed, send notice to old address
Mail.send(oldUserData.email, 'Email change in your DeFinMa database account',
'Hi, <br><br> Your email address of your DeFinMa account was changed to ' + data.mail +
'<br><br>If you actually did this, just delete this email.' +
'<br><br>If you did not change your email, someone might be messing around with your account, ' +
'so talk to the sysadmin quickly!<br><br>Have a nice day.' +
'<br><br>The DeFinMa team');
}
res.json(UserValidate.output(data));
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
// this path matches /user, /user/ and /user/xxx, but not /user/key or user/new.
// See https://forbeslindesay.github.io/express-route-tester/ for the generated regex
router.delete('/user:username([/](?!key|new).?*|/?)', (req, res, next) => {
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['predict', 'read', 'write', 'dev', 'admin'], 'basic')) return;
const username = getUsername(req, res);
if (!username) return;
const username = getUsername(req, res);
if (!username) return;
UserModel.findOneAndUpdate({name: username}, {status: globals.status.del}).log(req).lean().exec( (err, data:any) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'})
}
else {
res.status(404).json({status: 'Not found'});
}
});
UserModel.findOneAndUpdate({name: username}, {status: globals.status.del}).log(req).lean().exec( (err, data:any) => {
if (err) return next(err);
if (data) {
res.json({status: 'OK'})
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
router.put('/user/restore/:username', (req, res, next) => {
if (!req.auth(res, ['admin'], 'basic')) return;
if (!req.auth(res, ['admin'], 'basic')) return;
UserModel.findOneAndUpdate({name: req.params.username}, {status: globals.status.new})
.log(req).lean().exec((err, data) => {
if (err) return next(err);
UserModel.findOneAndUpdate({name: req.params.username}, {status: globals.status.new})
.log(req).lean().exec((err, data) => {
if (err) return next(err);
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
if (!data) {
return res.status(404).json({status: 'Not found'});
}
res.json({status: 'OK'});
});
});
router.get('/user/key', (req, res, next) => {
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'basic')) return;
if (!req.auth(res, ['read', 'write', 'dev', 'admin'], 'basic')) return;
UserModel.findOne({name: req.authDetails.username}).lean().exec( (err, data:any) => {
if (err) return next(err);
res.json({key: data.key});
});
UserModel.findOne({name: req.authDetails.username}).lean().exec( (err, data:any) => {
if (err) return next(err);
res.json({key: data.key});
});
});
router.post('/user/new', async (req, res, next) => {
if (!req.auth(res, ['admin'], 'basic')) return;
if (!req.auth(res, ['admin'], 'basic')) return;
// validate input
const {error, value: user} = UserValidate.input(req.body, 'new');
if (error) return res400(error, res);
// validate input
const {error, value: user} = UserValidate.input(req.body, 'new');
if (error) return res400(error, res);
// check that user does not already exist
if (!await usernameCheck(user.name, res, next)) return;
if (!await modelsCheck(user.models, res, next)) return;
// check that user does not already exist
if (!await usernameCheck(user.name, res, next)) return;
if (!await modelsCheck(user.models, res, next)) return;
user.key = mongoose.Types.ObjectId(); // use object id as unique API key
user.status = globals.status.new;
bcrypt.hash(user.pass, 10, (err, hash) => { // password hashing
user.pass = hash;
new UserModel(user).save((err, data) => { // store user
if (err) return next(err);
db.log(req, 'users', {_id: data._id}, data.toObject());
res.json(UserValidate.output(data.toObject()));
});
});
user.key = mongoose.Types.ObjectId(); // use object id as unique API key
user.status = globals.status.new;
bcrypt.hash(user.pass, 10, (err, hash) => { // password hashing
user.pass = hash;
new UserModel(user).save((err, data) => { // store user
if (err) return next(err);
db.log(req, 'users', {_id: data._id}, data.toObject());
res.json(UserValidate.output(data.toObject()));
});
});
});
router.post('/user/passreset', (req, res, next) => {
// check if user/email combo exists
UserModel.find({name: req.body.name, email: req.body.email}).lean().exec( (err, data: any) => {
if (err) return next(err);
if (data.length === 1) { // it exists
const newPass = Math.random().toString(36).substring(2); // generate temporary password
bcrypt.hash(newPass, 10, (err, hash) => { // password hashing
if (err) return next(err);
// check if user/email combo exists
UserModel.find({name: req.body.name, email: req.body.email}).lean().exec( (err, data: any) => {
if (err) return next(err);
if (data.length === 1) { // it exists
const newPass = Math.random().toString(36).substring(2); // generate temporary password
bcrypt.hash(newPass, 10, (err, hash) => { // password hashing
if (err) return next(err);
UserModel.findByIdAndUpdate(data[0]._id, {pass: hash}).log(req).exec(err => { // write new password
if (err) return next(err);
UserModel.findByIdAndUpdate(data[0]._id, {pass: hash}).log(req).exec(err => { // write new password
if (err) return next(err);
// send email
Mail.send(data[0].email, 'Your new password for the DeFinMa database',
'Hi, <br><br> You requested to reset your password.<br>Your new password is:<br><br>' + newPass + '' +
'<br><br>If you did not request a password reset, talk to the sysadmin quickly!<br><br>Have a nice day.' +
'<br><br>The DeFinMa team', err => {
if (err) return next(err);
res.json({status: 'OK'});
});
});
});
}
else {
res.status(404).json({status: 'Not found'});
}
});
// send email
Mail.send(data[0].email, 'Your new password for the DeFinMa database',
'Hi, <br><br> You requested to reset your password.<br>Your new password is:<br><br>' + newPass + '' +
'<br><br>If you did not request a password reset, talk to the sysadmin quickly!<br><br>Have a nice day.' +
'<br><br>The DeFinMa team', err => {
if (err) return next(err);
res.json({status: 'OK'});
});
});
});
}
else {
res.status(404).json({status: 'Not found'});
}
});
});
module.exports = router;
function getUsername (req, res) { // returns username or false if action is not allowed
req.params.username = req.params[0]; // because of path regex
if (req.params.username !== undefined) { // different username than request user
if (!req.auth(res, ['admin'], 'basic')) return false;
return req.params.username;
}
else {
return req.authDetails.username;
}
req.params.username = req.params[0]; // because of path regex
if (req.params.username !== undefined) { // different username than request user
if (!req.auth(res, ['admin'], 'basic')) return false;
return req.params.username;
}
else {
return req.authDetails.username;
}
}
async function usernameCheck (name, res, next) { // check if username is already taken
const userData = await UserModel.findOne({name: name}).lean().exec().catch(err => next(err)) as any;
if (userData instanceof Error) return false;
if (userData || UserValidate.isSpecialName(name)) {
res.status(400).json({status: 'Username already taken'});
return false;
}
return true;
const userData = await UserModel.findOne({name: name}).lean().exec().catch(err => next(err)) as any;
if (userData instanceof Error) return false;
if (userData || UserValidate.isSpecialName(name)) {
res.status(400).json({status: 'Username already taken'});
return false;
}
return true;
}
async function modelsCheck (models, res, next) { // check if model ids exist, returns false on error
let result = true;
for (let i in models) {
const model = await ModelModel.findOne({'models._id': mongoose.Types.ObjectId(models[i])})
.lean().exec().catch(err => next(err)) as any;
if(!model) {
res.status(400).json({status: 'Invalid model id'});
result = false;
break;
}
}
return result;
let result = true;
for (let i in models) {
const model = await ModelModel.findOne({'models._id': mongoose.Types.ObjectId(models[i])})
.lean().exec().catch(err => next(err)) as any;
if(!model) {
res.status(400).json({status: 'Invalid model id'});
result = false;
break;
}
}
return result;
}

50
src/routes/validate/help.ts
View File

@ -2,33 +2,33 @@ import Joi from 'joi';
import globals from '../../globals';
export default class HelpValidate {
private static help = {
text: Joi.string()
.allow('')
.max(8192),
private static help = {
text: Joi.string()
.allow('')
.max(8192),
level: Joi.string()
.valid('none', ...Object.values(globals.levels))
}
level: Joi.string()
.valid('none', ...Object.values(globals.levels))
}
static input (data) {
return Joi.object({
text: this.help.text.required(),
level: this.help.level.required()
}).validate(data);
}
static input (data) {
return Joi.object({
text: this.help.text.required(),
level: this.help.level.required()
}).validate(data);
}
static output (data) {
const {value, error} = Joi.object({
text: this.help.text,
level: this.help.level
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static output (data) {
const {value, error} = Joi.object({
text: this.help.text,
level: this.help.level
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static params(data) {
return Joi.object({
key: Joi.string().min(1).max(128)
}).validate(data);
}
static params(data) {
return Joi.object({
key: Joi.string().min(1).max(128)
}).validate(data);
}
}

50
src/routes/validate/id.ts
View File

@ -1,33 +1,33 @@
import Joi from 'joi';
export default class IdValidate {
private static id = Joi.string()
.pattern(new RegExp('[0-9a-f]{24}'))
.length(24)
.messages({'string.pattern.base': 'Invalid object id'});
private static id = Joi.string()
.pattern(new RegExp('[0-9a-f]{24}'))
.length(24)
.messages({'string.pattern.base': 'Invalid object id'});
static get () { // return joi validation
return this.id;
}
static get () { // return joi validation
return this.id;
}
static valid (id) { // validate id
return this.id.validate(id).error === undefined;
}
static valid (id) { // validate id
return this.id.validate(id).error === undefined;
}
static parameter () { // :id url parameter
return ':id([0-9a-f]{24})';
}
static parameter () { // :id url parameter
return ':id([0-9a-f]{24})';
}
static stringify (data) { // convert all ObjectID objects to plain strings
Object.keys(data).forEach(key => {
// stringify id
if (data[key] !== null && data[key].hasOwnProperty('_bsontype') && data[key]._bsontype === 'ObjectID') {
data[key] = data[key].toString();
}
else if (typeof data[key] === 'object' && data[key] !== null) { // deeper into recursion
data[key] = this.stringify(data[key]);
}
});
return data;
}
static stringify (data) { // convert all ObjectID objects to plain strings
Object.keys(data).forEach(key => {
// stringify id
if (data[key] !== null && data[key].hasOwnProperty('_bsontype') && data[key]._bsontype === 'ObjectID') {
data[key] = data[key].toString();
}
else if (typeof data[key] === 'object' && data[key] !== null) { // deeper into recursion
data[key] = this.stringify(data[key]);
}
});
return data;
}
}

168
src/routes/validate/material.ts
View File

@ -4,99 +4,99 @@ import IdValidate from './id';
import globals from '../../globals';
export default class MaterialValidate { // validate input for material
private static material = {
name: Joi.string()
.max(128),
private static material = {
name: Joi.string()
.max(128),
supplier: Joi.string()
.max(128),
supplier: Joi.string()
.max(128),
group: Joi.string()
.max(128),
group: Joi.string()
.max(128),
properties: Joi.object(),
properties: Joi.object(),
numbers: Joi.array()
.items(
Joi.string()
.max(64)
),
numbers: Joi.array()
.items(
Joi.string()
.max(64)
),
status: Joi.string()
.valid(...Object.values(globals.status))
};
status: Joi.string()
.valid(...Object.values(globals.status))
};
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
name: this.material.name.required(),
supplier: this.material.supplier.required(),
group: this.material.group.required(),
properties: this.material.properties.required(),
numbers: this.material.numbers.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
name: this.material.name,
supplier: this.material.supplier,
group: this.material.group,
properties: this.material.properties,
numbers: this.material.numbers
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
name: this.material.name.required(),
supplier: this.material.supplier.required(),
group: this.material.group.required(),
properties: this.material.properties.required(),
numbers: this.material.numbers.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
name: this.material.name,
supplier: this.material.supplier,
group: this.material.group,
properties: this.material.properties,
numbers: this.material.numbers
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
static output (data, status = false) { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
data.group = data.group_id.name;
data.supplier = data.supplier_id.name;
const validate: any = {
_id: IdValidate.get(),
name: this.material.name,
supplier: this.material.supplier,
group: this.material.group,
properties: this.material.properties,
numbers: this.material.numbers
};
if (status) {
validate.status = this.material.status;
}
const {value, error} = Joi.object(validate).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static output (data, status = false) { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
data.group = data.group_id.name;
data.supplier = data.supplier_id.name;
const validate: any = {
_id: IdValidate.get(),
name: this.material.name,
supplier: this.material.supplier,
group: this.material.group,
properties: this.material.properties,
numbers: this.material.numbers
};
if (status) {
validate.status = this.material.status;
}
const {value, error} = Joi.object(validate).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static outputGroups (data) {// validate groups output and strip unwanted properties, returns null if not valid
const {value, error} = this.material.group.validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static outputGroups (data) {// validate groups output and strip unwanted properties, returns null if not valid
const {value, error} = this.material.group.validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static outputSuppliers (data) {// validate suppliers output and strip unwanted properties, returns null if not valid
const {value, error} = this.material.supplier.validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static outputSuppliers (data) {// validate suppliers output and strip unwanted properties, returns null if not valid
const {value, error} = this.material.supplier.validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static outputV() { // return output validator
return Joi.object({
_id: IdValidate.get(),
name: this.material.name,
supplier: this.material.supplier,
group: this.material.group,
properties: this.material.properties,
numbers: this.material.numbers
});
}
static outputV() { // return output validator
return Joi.object({
_id: IdValidate.get(),
name: this.material.name,
supplier: this.material.supplier,
group: this.material.group,
properties: this.material.properties,
numbers: this.material.numbers
});
}
static query (data, dev = false) {
const acceptedStatuses = [globals.status.val, globals.status.new];
if (dev) { // dev and admin can also access deleted samples
acceptedStatuses.push(globals.status.del)
}
return Joi.object({
status: Joi.array().items(Joi.string().valid(...acceptedStatuses)).default([globals.status.val])
}).validate(data);
}
static query (data, dev = false) {
const acceptedStatuses = [globals.status.val, globals.status.new];
if (dev) { // dev and admin can also access deleted samples
acceptedStatuses.push(globals.status.del)
}
return Joi.object({
status: Joi.array().items(Joi.string().valid(...acceptedStatuses)).default([globals.status.val])
}).validate(data);
}
}

114
src/routes/validate/measurement.ts
View File

@ -4,64 +4,64 @@ import IdValidate from './id';
import globals from '../../globals';
export default class MeasurementValidate {
private static measurement = {
values: Joi.object()
.pattern(/.*/, Joi.alternatives()
.try(
Joi.string().max(128),
Joi.number(),
Joi.boolean(),
Joi.array().items(Joi.array().items(Joi.number())), // for spectra
Joi.array()
)
.allow(null)
)
};
private static measurement = {
values: Joi.object()
.pattern(/.*/, Joi.alternatives()
.try(
Joi.string().max(128),
Joi.number(),
Joi.boolean(),
Joi.array().items(Joi.array().items(Joi.number())), // for spectra
Joi.array()
)
.allow(null)
)
};
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
sample_id: IdValidate.get().required(),
values: this.measurement.values.required(),
measurement_template: IdValidate.get().required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
values: this.measurement.values
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
sample_id: IdValidate.get().required(),
values: this.measurement.values.required(),
measurement_template: IdValidate.get().required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
values: this.measurement.values
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
// validate output and strip unwanted properties, returns null if not valid
static output (data, req, status = false) {
data = IdValidate.stringify(data);
// spectral data not allowed for read/write users
if (['dev', 'admin'].indexOf(req.authDetails.level) < 0 && data.values[globals.spectrum.dpt]) {
delete data.values[globals.spectrum.dpt];
}
const validation: any = {
_id: IdValidate.get(),
sample_id: IdValidate.get(),
values: this.measurement.values,
measurement_template: IdValidate.get()
};
if (status) {
validation.status = Joi.string().valid(...Object.values(globals.status));
}
const {value, error} = Joi.object(validation).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
// validate output and strip unwanted properties, returns null if not valid
static output (data, req, status = false) {
data = IdValidate.stringify(data);
// spectral data not allowed for read/write users
if (['dev', 'admin'].indexOf(req.authDetails.level) < 0 && data.values[globals.spectrum.dpt]) {
delete data.values[globals.spectrum.dpt];
}
const validation: any = {
_id: IdValidate.get(),
sample_id: IdValidate.get(),
values: this.measurement.values,
measurement_template: IdValidate.get()
};
if (status) {
validation.status = Joi.string().valid(...Object.values(globals.status));
}
const {value, error} = Joi.object(validation).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static outputV() { // return output validator
return Joi.object({
_id: IdValidate.get(),
sample_id: IdValidate.get(),
values: this.measurement.values,
measurement_template: IdValidate.get()
});
}
static outputV() { // return output validator
return Joi.object({
_id: IdValidate.get(),
sample_id: IdValidate.get(),
values: this.measurement.values,
measurement_template: IdValidate.get()
});
}
}

62
src/routes/validate/model.ts
View File

@ -3,40 +3,40 @@ import IdValidate from './id';
export default class ModelValidate { // validate input for model
private static model = {
group: Joi.string()
.disallow('file')
.max(128),
private static model = {
group: Joi.string()
.disallow('file')
.max(128),
model: Joi.object({
name: Joi.string()
.max(128)
.required(),
model: Joi.object({
name: Joi.string()
.max(128)
.required(),
url: Joi.string()
.uri()
.max(512)
.required()
})
};
url: Joi.string()
.uri()
.max(512)
.required()
})
};
static input (data) { // validate input
return this.model.model.required().validate(data);
}
static input (data) { // validate input
return this.model.model.required().validate(data);
}
static output (data) { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
const {value, error} = Joi.object({
group: this.model.group,
models: Joi.array().items(this.model.model.append({_id: IdValidate.get()}))
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static output (data) { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
const {value, error} = Joi.object({
group: this.model.group,
models: Joi.array().items(this.model.model.append({_id: IdValidate.get()}))
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static fileOutput (data) {
return {
name: data.name,
size: data.data.length
}
}
static fileOutput (data) {
return {
name: data.name,
size: data.data.length
}
}
}

24
src/routes/validate/note_field.ts
View File

@ -1,18 +1,18 @@
import Joi from 'joi';
export default class NoteFieldValidate {
private static note_field = {
name: Joi.string()
.max(128),
private static note_field = {
name: Joi.string()
.max(128),
qty: Joi.number()
};
qty: Joi.number()
};
static output (data) { // validate output and strip unwanted properties, returns null if not valid
const {value, error} = Joi.object({
name: this.note_field.name,
qty: this.note_field.qty
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static output (data) { // validate output and strip unwanted properties, returns null if not valid
const {value, error} = Joi.object({
name: this.note_field.name,
qty: this.note_field.qty
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
}

76
src/routes/validate/parameters.ts
View File

@ -1,42 +1,42 @@
import Joi from 'joi';
export default class ParametersValidate {
// data to validate, parameters from template, param: 'new', 'change', 'null'(null values are allowed)
static input (data, parameters, param) {
let joiObject = {};
parameters.forEach(parameter => {
switch (parameter.range.type) {
case 'number': joiObject[parameter.name] = Joi.number();
break;
case 'boolean': joiObject[parameter.name] = Joi.boolean();
break;
case 'array': joiObject[parameter.name] = Joi.array();
break;
case 'string': joiObject[parameter.name] = Joi.string().max(128);
break; // min or max implicitly define the value to be a number
default: if (parameter.range.hasOwnProperty('min') || parameter.range.hasOwnProperty('max')) {
joiObject[parameter.name] = Joi.number();
}
else {
joiObject[parameter.name] = Joi.string().max(128);
}
}
if (parameter.range.hasOwnProperty('min')) {
joiObject[parameter.name] = joiObject[parameter.name].min(parameter.range.min)
}
if (parameter.range.hasOwnProperty('max')) {
joiObject[parameter.name] = joiObject[parameter.name].max(parameter.range.max)
}
if (parameter.range.hasOwnProperty('values')) {
joiObject[parameter.name] = joiObject[parameter.name].valid(...parameter.range.values);
}
if (parameter.range.hasOwnProperty('required') && parameter.range.required) {
joiObject[parameter.name] = joiObject[parameter.name].required();
}
if (param === 'null') {
joiObject[parameter.name] = joiObject[parameter.name].allow(null)
}
});
return Joi.object(joiObject).validate(data);
}
// data to validate, parameters from template, param: 'new', 'change', 'null'(null values are allowed)
static input (data, parameters, param) {
let joiObject = {};
parameters.forEach(parameter => {
switch (parameter.range.type) {
case 'number': joiObject[parameter.name] = Joi.number();
break;
case 'boolean': joiObject[parameter.name] = Joi.boolean();
break;
case 'array': joiObject[parameter.name] = Joi.array();
break;
case 'string': joiObject[parameter.name] = Joi.string().max(128);
break; // min or max implicitly define the value to be a number
default: if (parameter.range.hasOwnProperty('min') || parameter.range.hasOwnProperty('max')) {
joiObject[parameter.name] = Joi.number();
}
else {
joiObject[parameter.name] = Joi.string().max(128);
}
}
if (parameter.range.hasOwnProperty('min')) {
joiObject[parameter.name] = joiObject[parameter.name].min(parameter.range.min)
}
if (parameter.range.hasOwnProperty('max')) {
joiObject[parameter.name] = joiObject[parameter.name].max(parameter.range.max)
}
if (parameter.range.hasOwnProperty('values')) {
joiObject[parameter.name] = joiObject[parameter.name].valid(...parameter.range.values);
}
if (parameter.range.hasOwnProperty('required') && parameter.range.required) {
joiObject[parameter.name] = joiObject[parameter.name].required();
}
if (param === 'null') {
joiObject[parameter.name] = joiObject[parameter.name].allow(null)
}
});
return Joi.object(joiObject).validate(data);
}
}

2
src/routes/validate/res400.ts
View File

@ -1,5 +1,5 @@
// respond with 400 and include error details from the joi validation
export default function res400 (error, res) {
res.status(400).json({status: 'Invalid body format', details: error.details[0].message});
res.status(400).json({status: 'Invalid body format', details: error.details[0].message});
}

76
src/routes/validate/root.ts
View File

@ -2,50 +2,50 @@ import Joi from 'joi';
import IdValidate from './id';
export default class RootValidate { // validate input for root methods
private static changelog = {
timestamp: Joi.date()
.iso()
.min('1970-01-01T00:00:00.000Z'),
private static changelog = {
timestamp: Joi.date()
.iso()
.min('1970-01-01T00:00:00.000Z'),
page: Joi.number()
.integer()
.min(0)
.default(0),
page: Joi.number()
.integer()
.min(0)
.default(0),
pagesize: Joi.number()
.integer()
.min(0)
.default(25),
pagesize: Joi.number()
.integer()
.min(0)
.default(25),
action: Joi.string(),
action: Joi.string(),
collection: Joi.string(),
collection: Joi.string(),
conditions: Joi.object(),
conditions: Joi.object(),
data: Joi.object()
};
data: Joi.object()
};
static changelogParams (data) {
return Joi.object({
id: IdValidate.get(),
page: this.changelog.page,
pagesize: this.changelog.pagesize
}).validate(data);
}
static changelogParams (data) {
return Joi.object({
id: IdValidate.get(),
page: this.changelog.page,
pagesize: this.changelog.pagesize
}).validate(data);
}
static changelogOutput (data) {
data.date = data._id.getTimestamp();
data.collection = data.collection_name;
data = IdValidate.stringify(data);
const {value, error} = Joi.object({
_id: IdValidate.get(),
date: this.changelog.timestamp,
action: this.changelog.action,
collection: this.changelog.collection,
conditions: this.changelog.conditions,
data: this.changelog.data,
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static changelogOutput (data) {
data.date = data._id.getTimestamp();
data.collection = data.collection_name;
data = IdValidate.stringify(data);
const {value, error} = Joi.object({
_id: IdValidate.get(),
date: this.changelog.timestamp,
action: this.changelog.action,
collection: this.changelog.collection,
conditions: this.changelog.conditions,
data: this.changelog.data,
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
}

506
src/routes/validate/sample.ts
View File

@ -8,273 +8,273 @@ import globals from '../../globals';
export default class SampleValidate {
private static sample = {
number: Joi.string()
.max(128),
private static sample = {
number: Joi.string()
.max(128),
color: Joi.string()
.max(128)
.allow(''),
color: Joi.string()
.max(128)
.allow(''),
type: Joi.string()
.valid('as-delivered/raw', 'processed'),
type: Joi.string()
.valid('as-delivered/raw', 'processed'),
batch: Joi.string()
.max(128)
.allow(''),
batch: Joi.string()
.max(128)
.allow(''),
condition: Joi.object(),
condition: Joi.object(),
notes: Joi.object({
comment: Joi.string()
.max(512)
.allow('')
.allow(null),
notes: Joi.object({
comment: Joi.string()
.max(512)
.allow('')
.allow(null),
sample_references: Joi.array()
.items(Joi.object({
sample_id: IdValidate.get(),
sample_references: Joi.array()
.items(Joi.object({
sample_id: IdValidate.get(),
relation: Joi.string()
.max(128)
})),
relation: Joi.string()
.max(128)
})),
custom_fields: Joi.object()
.pattern(/.*/, Joi.alternatives()
.try(
Joi.string().max(128),
Joi.number(),
Joi.boolean(),
Joi.date()
)
)
}),
custom_fields: Joi.object()
.pattern(/.*/, Joi.alternatives()
.try(
Joi.string().max(128),
Joi.number(),
Joi.boolean(),
Joi.date()
)
)
}),
added: Joi.date()
.iso()
.min('1970-01-01T00:00:00.000Z'),
added: Joi.date()
.iso()
.min('1970-01-01T00:00:00.000Z'),
status: Joi.string()
.valid(...Object.values(globals.status))
};
status: Joi.string()
.valid(...Object.values(globals.status))
};
static readonly sampleKeys = [ // keys which can be found in the sample directly
'_id',
'color',
'number',
'type',
'batch',
'added',
'condition',
'material_id',
'note_id',
'user_id'
];
static readonly sampleKeys = [ // keys which can be found in the sample directly
'_id',
'color',
'number',
'type',
'batch',
'added',
'condition',
'material_id',
'note_id',
'user_id'
];
private static sortKeys = [
'_id',
'color',
'number',
'type',
'batch',
'added',
'status',
'notes.comment',
'material.name',
'material.supplier',
'material.group',
'material.properties.*',
'condition.*',
`measurements.(?!${globals.spectrum.spectrum}.${globals.spectrum.dpt})*`
];
private static sortKeys = [
'_id',
'color',
'number',
'type',
'batch',
'added',
'status',
'notes.comment',
'material.name',
'material.supplier',
'material.group',
'material.properties.*',
'condition.*',
`measurements.(?!${globals.spectrum.spectrum}.${globals.spectrum.dpt})*`
];
private static fieldKeys = [
...SampleValidate.sortKeys,
'condition',
'notes',
'material_id',
'material',
'note_id',
'user_id',
'material._id',
'material.numbers',
'measurements',
`measurements.${globals.spectrum.spectrum}.${globals.spectrum.dpt}`,
];
private static fieldKeys = [
...SampleValidate.sortKeys,
'condition',
'notes',
'material_id',
'material',
'note_id',
'user_id',
'material._id',
'material.numbers',
'measurements',
`measurements.${globals.spectrum.spectrum}.${globals.spectrum.dpt}`,
];
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
color: this.sample.color.required(),
type: this.sample.type.required(),
batch: this.sample.batch.required(),
condition: this.sample.condition.required(),
material_id: IdValidate.get().required(),
notes: this.sample.notes.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
color: this.sample.color,
type: this.sample.type,
batch: this.sample.batch,
condition: this.sample.condition,
material_id: IdValidate.get(),
notes: this.sample.notes,
}).validate(data);
}
else if (param === 'new-admin') {
return Joi.object({
number: this.sample.number,
color: this.sample.color.required(),
type: this.sample.type.required(),
batch: this.sample.batch.required(),
condition: this.sample.condition.required(),
material_id: IdValidate.get().required(),
notes: this.sample.notes.required()
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
color: this.sample.color.required(),
type: this.sample.type.required(),
batch: this.sample.batch.required(),
condition: this.sample.condition.required(),
material_id: IdValidate.get().required(),
notes: this.sample.notes.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
color: this.sample.color,
type: this.sample.type,
batch: this.sample.batch,
condition: this.sample.condition,
material_id: IdValidate.get(),
notes: this.sample.notes,
}).validate(data);
}
else if (param === 'new-admin') {
return Joi.object({
number: this.sample.number,
color: this.sample.color.required(),
type: this.sample.type.required(),
batch: this.sample.batch.required(),
condition: this.sample.condition.required(),
material_id: IdValidate.get().required(),
notes: this.sample.notes.required()
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
// validate output and strip unwanted properties, returns null if not valid
static output (data, param = 'refs+added', additionalParams = []) {
if (param === 'refs+added') {
param = 'refs';
data.added = data._id.getTimestamp();
}
data = IdValidate.stringify(data);
let joiObject;
if (param === 'refs') {
joiObject = {
_id: IdValidate.get(),
number: this.sample.number,
color: this.sample.color,
type: this.sample.type,
batch: this.sample.batch,
condition: this.sample.condition,
material_id: IdValidate.get(),
material: MaterialValidate.outputV().append({number: Joi.string().max(128).allow('')}),
note_id: IdValidate.get().allow(null),
notes: this.sample.notes,
user_id: IdValidate.get(),
added: this.sample.added,
status: this.sample.status
};
}
else if(param === 'details') {
joiObject = {
_id: IdValidate.get(),
number: this.sample.number,
color: this.sample.color,
type: this.sample.type,
batch: this.sample.batch,
condition: this.sample.condition,
material: MaterialValidate.outputV(),
measurements: Joi.array().items(MeasurementValidate.outputV()),
notes: this.sample.notes,
user: UserValidate.username(),
status: this.sample.status
}
}
else {
return null;
}
additionalParams.forEach(param => {
joiObject[param] = Joi.any();
});
const {value, error} = Joi.object(joiObject).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
// validate output and strip unwanted properties, returns null if not valid
static output (data, param = 'refs+added', additionalParams = []) {
if (param === 'refs+added') {
param = 'refs';
data.added = data._id.getTimestamp();
}
data = IdValidate.stringify(data);
let joiObject;
if (param === 'refs') {
joiObject = {
_id: IdValidate.get(),
number: this.sample.number,
color: this.sample.color,
type: this.sample.type,
batch: this.sample.batch,
condition: this.sample.condition,
material_id: IdValidate.get(),
material: MaterialValidate.outputV().append({number: Joi.string().max(128).allow('')}),
note_id: IdValidate.get().allow(null),
notes: this.sample.notes,
user_id: IdValidate.get(),
added: this.sample.added,
status: this.sample.status
};
}
else if(param === 'details') {
joiObject = {
_id: IdValidate.get(),
number: this.sample.number,
color: this.sample.color,
type: this.sample.type,
batch: this.sample.batch,
condition: this.sample.condition,
material: MaterialValidate.outputV(),
measurements: Joi.array().items(MeasurementValidate.outputV()),
notes: this.sample.notes,
user: UserValidate.username(),
status: this.sample.status
}
}
else {
return null;
}
additionalParams.forEach(param => {
joiObject[param] = Joi.any();
});
const {value, error} = Joi.object(joiObject).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static query (data, dev = false) {
if (data.filters && data.filters.length) {
const filterValidation = Joi.array().items(Joi.string()).validate(data.filters);
if (filterValidation.error) return filterValidation;
try {
for (let i in data.filters) {
try {
data.filters[i] = decodeURIComponent(data.filters[i]);
}
catch (ignore) {}
data.filters[i] = JSON.parse(data.filters[i]);
data.filters[i].values = data.filters[i].values.map(e => { // validate filter values
if (e === null) { // null values are always allowed
return null;
}
let validator;
let field = data.filters[i].field;
if (/material\./.test(field)) { // select right validation model
validator = MaterialValidate.outputV().append({
number: Joi.string().max(128).allow(''),
properties: Joi.alternatives().try(Joi.number(), Joi.string().max(128).allow(''))
});
field = field.replace('material.', '').split('.')[0];
}
else if (/measurements\./.test(field) || /condition\./.test(field)) {
validator = Joi.object({
value: Joi.alternatives()
.try(
Joi.number(),
Joi.string().max(128).allow(''),
Joi.boolean(),
Joi.array()
)
.allow(null)
});
field = 'value';
}
else if (field === 'measurements') {
validator = Joi.object({
value: Joi.object({}).allow(null).disallow({})
});
field = 'value';
}
else if (field === 'notes.comment') {
field = 'comment';
validator = this.sample.notes
}
else {
validator = Joi.object(this.sample);
}
const {value, error} = validator.validate({[field]: e});
if (error) throw error; // reject invalid values
return value[field];
});
}
}
catch (err) {
return {error: {details: [{message: 'Invalid JSON string for filter parameter'}]}, value: null}
}
}
const acceptedStatuses = [globals.status.val, globals.status.new];
if (dev) { // dev and admin can also access deleted samples
acceptedStatuses.push(globals.status.del)
}
return Joi.object({
status: Joi.array().items(Joi.string().valid(...acceptedStatuses)).default([globals.status.val]),
'from-id': IdValidate.get(),
'to-page': Joi.number().integer(),
'page-size': Joi.number().integer().min(1),
sort: Joi.string().pattern(
new RegExp('^(' + this.sortKeys.join('|').replace(/\./g, '\\.').replace(/\*/g, '.+') + ')-(asc|desc)$', 'm')
).default('_id-asc'),
output: Joi.string().valid('json', 'flatten', 'csv').default('json'),
fields: Joi.array().items(Joi.string().pattern(
new RegExp('^(' + this.fieldKeys.join('|').replace(/\./g, '\\.').replace(/\*/g, '.+') + ')$', 'm')
)).default(['_id','number','type','batch','material_id','color','condition','note_id','user_id','added'])
.messages({'string.pattern.base': 'Invalid field name'}),
filters: Joi.array().items(Joi.object({
mode: Joi.string().valid('eq', 'ne', 'lt', 'lte', 'gt', 'gte', 'in', 'nin', 'stringin'),
field: Joi.string().pattern(
new RegExp('^(' + this.fieldKeys.join('|').replace(/\./g, '\\.').replace(/\*/g, '.+') + ')$', 'm')
).messages({'string.pattern.base': 'Invalid filter field name'}),
values: Joi.array().items(Joi.alternatives().try(
Joi.string().max(128).allow(''), Joi.number(), Joi.boolean(), Joi.date().iso(), Joi.object(), null
)).min(1)
})).default([])
}).with('to-page', 'page-size').validate(data);
}
static query (data, dev = false) {
if (data.filters && data.filters.length) {
const filterValidation = Joi.array().items(Joi.string()).validate(data.filters);
if (filterValidation.error) return filterValidation;
try {
for (let i in data.filters) {
try {
data.filters[i] = decodeURIComponent(data.filters[i]);
}
catch (ignore) {}
data.filters[i] = JSON.parse(data.filters[i]);
data.filters[i].values = data.filters[i].values.map(e => { // validate filter values
if (e === null) { // null values are always allowed
return null;
}
let validator;
let field = data.filters[i].field;
if (/material\./.test(field)) { // select right validation model
validator = MaterialValidate.outputV().append({
number: Joi.string().max(128).allow(''),
properties: Joi.alternatives().try(Joi.number(), Joi.string().max(128).allow(''))
});
field = field.replace('material.', '').split('.')[0];
}
else if (/measurements\./.test(field) || /condition\./.test(field)) {
validator = Joi.object({
value: Joi.alternatives()
.try(
Joi.number(),
Joi.string().max(128).allow(''),
Joi.boolean(),
Joi.array()
)
.allow(null)
});
field = 'value';
}
else if (field === 'measurements') {
validator = Joi.object({
value: Joi.object({}).allow(null).disallow({})
});
field = 'value';
}
else if (field === 'notes.comment') {
field = 'comment';
validator = this.sample.notes
}
else {
validator = Joi.object(this.sample);
}
const {value, error} = validator.validate({[field]: e});
if (error) throw error; // reject invalid values
return value[field];
});
}
}
catch (err) {
return {error: {details: [{message: 'Invalid JSON string for filter parameter'}]}, value: null}
}
}
const acceptedStatuses = [globals.status.val, globals.status.new];
if (dev) { // dev and admin can also access deleted samples
acceptedStatuses.push(globals.status.del)
}
return Joi.object({
status: Joi.array().items(Joi.string().valid(...acceptedStatuses)).default([globals.status.val]),
'from-id': IdValidate.get(),
'to-page': Joi.number().integer(),
'page-size': Joi.number().integer().min(1),
sort: Joi.string().pattern(
new RegExp('^(' + this.sortKeys.join('|').replace(/\./g, '\\.').replace(/\*/g, '.+') + ')-(asc|desc)$', 'm')
).default('_id-asc'),
output: Joi.string().valid('json', 'flatten', 'csv').default('json'),
fields: Joi.array().items(Joi.string().pattern(
new RegExp('^(' + this.fieldKeys.join('|').replace(/\./g, '\\.').replace(/\*/g, '.+') + ')$', 'm')
)).default(['_id','number','type','batch','material_id','color','condition','note_id','user_id','added'])
.messages({'string.pattern.base': 'Invalid field name'}),
filters: Joi.array().items(Joi.object({
mode: Joi.string().valid('eq', 'ne', 'lt', 'lte', 'gt', 'gte', 'in', 'nin', 'stringin'),
field: Joi.string().pattern(
new RegExp('^(' + this.fieldKeys.join('|').replace(/\./g, '\\.').replace(/\*/g, '.+') + ')$', 'm')
).messages({'string.pattern.base': 'Invalid filter field name'}),
values: Joi.array().items(Joi.alternatives().try(
Joi.string().max(128).allow(''), Joi.number(), Joi.boolean(), Joi.date().iso(), Joi.object(), null
)).min(1)
})).default([])
}).with('to-page', 'page-size').validate(data);
}
}

114
src/routes/validate/template.ts
View File

@ -2,70 +2,70 @@ import Joi from 'joi';
import IdValidate from './id';
export default class TemplateValidate {
private static template = {
name: Joi.string()
.max(128),
private static template = {
name: Joi.string()
.max(128),
version: Joi.number()
.min(1),
version: Joi.number()
.min(1),
parameters: Joi.array()
.items(
Joi.object({
name: Joi.string()
.max(128)
.invalid('condition_template', 'material_template')
.pattern(/^[^.]+$/)
.required()
.messages({'string.pattern.base': 'name must not contain a dot'}),
parameters: Joi.array()
.items(
Joi.object({
name: Joi.string()
.max(128)
.invalid('condition_template', 'material_template')
.pattern(/^[^.]+$/)
.required()
.messages({'string.pattern.base': 'name must not contain a dot'}),
range: Joi.object({
values: Joi.array()
.min(1),
range: Joi.object({
values: Joi.array()
.min(1),
min: Joi.number(),
min: Joi.number(),
max: Joi.number(),
max: Joi.number(),
type: Joi.string()
.valid('string', 'number', 'boolean', 'array'),
type: Joi.string()
.valid('string', 'number', 'boolean', 'array'),
required: Joi.boolean()
})
.oxor('values', 'min')
.oxor('values', 'max')
.required()
})
)
};
required: Joi.boolean()
})
.oxor('values', 'min')
.oxor('values', 'max')
.required()
})
)
};
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
name: this.template.name.required(),
parameters: this.template.parameters.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
name: this.template.name,
parameters: this.template.parameters
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
name: this.template.name.required(),
parameters: this.template.parameters.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
name: this.template.name,
parameters: this.template.parameters
}).validate(data);
}
else {
return{error: 'No parameter specified!', value: {}};
}
}
static output (data) { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
const {value, error} = Joi.object({
_id: IdValidate.get(),
name: this.template.name,
version: this.template.version,
first_id: IdValidate.get(),
parameters: this.template.parameters
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static output (data) { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
const {value, error} = Joi.object({
_id: IdValidate.get(),
name: this.template.name,
version: this.template.version,
first_id: IdValidate.get(),
parameters: this.template.parameters
}).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
}

176
src/routes/validate/user.ts
View File

@ -4,104 +4,104 @@ import globals from '../../globals';
import IdValidate from './id';
export default class UserValidate { // validate input for user
private static user = {
name: Joi.string()
.lowercase()
.pattern(new RegExp('^[a-z0-9-_.]+$'))
.max(128)
.messages({'string.pattern.base': 'name must only contain a-z0-9_.'}),
private static user = {
name: Joi.string()
.lowercase()
.pattern(new RegExp('^[a-z0-9-_.]+$'))
.max(128)
.messages({'string.pattern.base': 'name must only contain a-z0-9_.'}),
email: Joi.string()
.email({minDomainSegments: 2})
.lowercase()
.max(128),
email: Joi.string()
.email({minDomainSegments: 2})
.lowercase()
.max(128),
pass: Joi.string()
.min(8)
.max(128),
pass: Joi.string()
.min(8)
.max(128),
level: Joi.string()
.valid(...Object.values(globals.levels)),
level: Joi.string()
.valid(...Object.values(globals.levels)),
location: Joi.string()
.alphanum()
.max(128),
location: Joi.string()
.alphanum()
.max(128),
devices: Joi.array()
.items(Joi.string()
.allow('')
.max(128)
),
devices: Joi.array()
.items(Joi.string()
.allow('')
.max(128)
),
models: Joi.array()
.items(IdValidate.get()),
models: Joi.array()
.items(IdValidate.get()),
status: Joi.string()
.valid(...Object.values(globals.status))
};
status: Joi.string()
.valid(...Object.values(globals.status))
};
private static specialUsernames: string[] = ['admin', 'user', 'key', 'new', 'passreset']; // names a user cannot take
private static specialUsernames: string[] = ['admin', 'user', 'key', 'new', 'passreset']; // names a user cannot take
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
name: this.user.name.required(),
email: this.user.email.required(),
pass: this.user.pass.required(),
level: this.user.level.required(),
location: this.user.location.required(),
devices: this.user.devices.required(),
models: this.user.models.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
name: this.user.name,
email: this.user.email,
pass: this.user.pass,
location: this.user.location,
devices: this.user.devices
}).validate(data);
}
else if (param === 'changeadmin') {
return Joi.object({
name: this.user.name,
email: this.user.email,
pass: this.user.pass,
level: this.user.level,
location: this.user.location,
devices: this.user.devices,
models: this.user.models
}).validate(data);
}
else {
return {error: 'No parameter specified!', value: {}};
}
}
static input (data, param) { // validate input, set param to 'new' to make all attributes required
if (param === 'new') {
return Joi.object({
name: this.user.name.required(),
email: this.user.email.required(),
pass: this.user.pass.required(),
level: this.user.level.required(),
location: this.user.location.required(),
devices: this.user.devices.required(),
models: this.user.models.required()
}).validate(data);
}
else if (param === 'change') {
return Joi.object({
name: this.user.name,
email: this.user.email,
pass: this.user.pass,
location: this.user.location,
devices: this.user.devices
}).validate(data);
}
else if (param === 'changeadmin') {
return Joi.object({
name: this.user.name,
email: this.user.email,
pass: this.user.pass,
level: this.user.level,
location: this.user.location,
devices: this.user.devices,
models: this.user.models
}).validate(data);
}
else {
return {error: 'No parameter specified!', value: {}};
}
}
static output (data, param = '') { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
const validate: {[key: string]: object} = {
_id: IdValidate.get(),
name: this.user.name,
email: this.user.email,
level: this.user.level,
location: this.user.location,
devices: this.user.devices,
models: this.user.models
}
if (param === 'admin') {
validate.status = this.user.status;
}
const {value, error} = Joi.object(validate).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static output (data, param = '') { // validate output and strip unwanted properties, returns null if not valid
data = IdValidate.stringify(data);
const validate: {[key: string]: object} = {
_id: IdValidate.get(),
name: this.user.name,
email: this.user.email,
level: this.user.level,
location: this.user.location,
devices: this.user.devices,
models: this.user.models
}
if (param === 'admin') {
validate.status = this.user.status;
}
const {value, error} = Joi.object(validate).validate(data, {stripUnknown: true});
return error !== undefined? null : value;
}
static isSpecialName (name) { // true if name belongs to special names
return this.specialUsernames.indexOf(name) > -1;
}
static isSpecialName (name) { // true if name belongs to special names
return this.specialUsernames.indexOf(name) > -1;
}
static username() {
return this.user.name;
}
static username() {
return this.user.name;
}
}

262
src/test/helper.ts
View File

@ -7,141 +7,141 @@ import IdValidate from '../routes/validate/id';
export default class TestHelper {
public static auth = { // test user credentials
admin: {pass: 'Abc123!#', key: '000000000000000000001003', id: '000000000000000000000003'},
janedoe: {pass: 'Xyz890*)', key: '000000000000000000001002', id: '000000000000000000000002'},
user: {pass: 'Xyz890*)', key: '000000000000000000001001', id: '000000000000000000000001'},
johnnydoe: {pass: 'Xyz890*)', key: '000000000000000000001004', id: '000000000000000000000004'},
customer: {pass: 'Xyz890*)', key: '000000000000000000001005', id: '000000000000000000000005'}
}
public static auth = { // test user credentials
admin: {pass: 'Abc123!#', key: '000000000000000000001003', id: '000000000000000000000003'},
janedoe: {pass: 'Xyz890*)', key: '000000000000000000001002', id: '000000000000000000000002'},
user: {pass: 'Xyz890*)', key: '000000000000000000001001', id: '000000000000000000000001'},
johnnydoe: {pass: 'Xyz890*)', key: '000000000000000000001004', id: '000000000000000000000004'},
customer: {pass: 'Xyz890*)', key: '000000000000000000001005', id: '000000000000000000000005'}
}
public static res = { // default responses
400: {status: 'Bad request'},
401: {status: 'Unauthorized'},
403: {status: 'Forbidden'},
404: {status: 'Not found'},
500: {status: 'Internal server error'}
}
public static res = { // default responses
400: {status: 'Bad request'},
401: {status: 'Unauthorized'},
403: {status: 'Forbidden'},
404: {status: 'Not found'},
500: {status: 'Internal server error'}
}
static before (done) {
process.env.port = '2999';
process.env.NODE_ENV = 'test';
db.connect('test', done);
}
static before (done) {
process.env.port = '2999';
process.env.NODE_ENV = 'test';
db.connect('test', done);
}
static beforeEach (server, done) {
// delete cached server code except models as these are needed in the testing files as well
Object.keys(require.cache).filter(e => /API\\dist\\(?!(models|db|test))/.test(e)).forEach(key => {
delete require.cache[key]; // prevent loading from cache
});
server = require('../index');
db.drop(err => { // reset database
if (err) return done(err);
db.loadJson(require('./db.json'), done);
});
return server
}
static beforeEach (server, done) {
// delete cached server code except models as these are needed in the testing files as well
Object.keys(require.cache).filter(e => /API\\dist\\(?!(models|db|test))/.test(e)).forEach(key => {
delete require.cache[key]; // prevent loading from cache
});
server = require('../index');
db.drop(err => { // reset database
if (err) return done(err);
db.loadJson(require('./db.json'), done);
});
return server
}
// options in form: {method, url, contentType, auth: {key/basic: 'name' or 'key'/{name, pass}}, httpStatus, req, res,
// default (set to false if you want to dismiss default .end handling)}
static request (server, done, options) {
let st = supertest(server);
if (options.hasOwnProperty('auth') && options.auth.hasOwnProperty('key')) { // resolve API key
options.url += '?key=' +
(this.auth.hasOwnProperty(options.auth.key)? this.auth[options.auth.key].key : options.auth.key);
}
switch (options.method) { // http method
case 'get':
st = st.get(options.url)
break;
case 'post':
st = st.post(options.url)
break;
case 'put':
st = st.put(options.url)
break;
case 'delete':
st = st.delete(options.url)
break;
}
if (options.hasOwnProperty('reqType')) { // request body
st = st.type(options.reqType);
}
if (options.hasOwnProperty('req')) { // request body
st = st.send(options.req);
}
if (options.hasOwnProperty('reqContentType')) { // request body
st = st.set('Content-Type', options.reqContentType);
}
if (options.hasOwnProperty('auth') && options.auth.hasOwnProperty('basic')) { // resolve basic auth
if (this.auth.hasOwnProperty(options.auth.basic)) {
st = st.auth(options.auth.basic, this.auth[options.auth.basic].pass)
}
else {
st = st.auth(options.auth.basic.name, options.auth.basic.pass)
}
}
if (options.hasOwnProperty('contentType')) {
st = st.expect('Content-type', options.contentType).expect(options.httpStatus);
}
else {
st = st.expect('Content-type', /json/).expect(options.httpStatus);
}
if (options.hasOwnProperty('res')) { // evaluate result
return st.end((err, res) => {
if (err) return done (err);
should(res.body).be.eql(options.res);
done();
});
}
else if (this.res.hasOwnProperty(options.httpStatus) && options.default !== false) { // evaluate default results
return st.end((err, res) => {
if (err) return done (err);
should(res.body).be.eql(this.res[options.httpStatus]);
done();
});
}
// check changelog, takes log: {collection, skip, data/(dataAdd, dataIgn)}
else if (options.hasOwnProperty('log')) {
return st.end(err => {
if (err) return done (err);
ChangelogModel.findOne({}).sort({_id: -1}).skip(options.log.skip? options.log.skip : 0)
.lean().exec((err, data) => { // latest entry
if (err) return done(err);
should(data).have.only.keys('_id', 'action', 'collection_name', 'conditions', 'data', 'user_id', '__v');
should(data).have.property('action', options.method.toUpperCase() + ' ' + options.url);
should(data).have.property('collection_name', options.log.collection);
if (options.log.hasOwnProperty('data')) {
should(data).have.property('data', options.log.data);
}
else {
const ignore = ['_id', '__v'];
if (options.log.hasOwnProperty('dataIgn')) {
ignore.push(...options.log.dataIgn);
}
let tmp = options.req ? options.req : {};
if (options.log.hasOwnProperty('dataAdd')) {
_.assign(tmp, options.log.dataAdd)
}
should(IdValidate.stringify(_.omit(data.data, ignore))).be.eql(_.omit(tmp, ignore));
}
if (data.user_id) {
should(data.user_id.toString()).be.eql(this.auth[options.auth.basic].id);
}
done();
});
});
}
else { // return object to do .end() manually
return st;
}
}
// options in form: {method, url, contentType, auth: {key/basic: 'name' or 'key'/{name, pass}}, httpStatus, req, res,
// default (set to false if you want to dismiss default .end handling)}
static request (server, done, options) {
let st = supertest(server);
if (options.hasOwnProperty('auth') && options.auth.hasOwnProperty('key')) { // resolve API key
options.url += '?key=' +
(this.auth.hasOwnProperty(options.auth.key)? this.auth[options.auth.key].key : options.auth.key);
}
switch (options.method) { // http method
case 'get':
st = st.get(options.url)
break;
case 'post':
st = st.post(options.url)
break;
case 'put':
st = st.put(options.url)
break;
case 'delete':
st = st.delete(options.url)
break;
}
if (options.hasOwnProperty('reqType')) { // request body
st = st.type(options.reqType);
}
if (options.hasOwnProperty('req')) { // request body
st = st.send(options.req);
}
if (options.hasOwnProperty('reqContentType')) { // request body
st = st.set('Content-Type', options.reqContentType);
}
if (options.hasOwnProperty('auth') && options.auth.hasOwnProperty('basic')) { // resolve basic auth
if (this.auth.hasOwnProperty(options.auth.basic)) {
st = st.auth(options.auth.basic, this.auth[options.auth.basic].pass)
}
else {
st = st.auth(options.auth.basic.name, options.auth.basic.pass)
}
}
if (options.hasOwnProperty('contentType')) {
st = st.expect('Content-type', options.contentType).expect(options.httpStatus);
}
else {
st = st.expect('Content-type', /json/).expect(options.httpStatus);
}
if (options.hasOwnProperty('res')) { // evaluate result
return st.end((err, res) => {
if (err) return done (err);
should(res.body).be.eql(options.res);
done();
});
}
else if (this.res.hasOwnProperty(options.httpStatus) && options.default !== false) { // evaluate default results
return st.end((err, res) => {
if (err) return done (err);
should(res.body).be.eql(this.res[options.httpStatus]);
done();
});
}
// check changelog, takes log: {collection, skip, data/(dataAdd, dataIgn)}
else if (options.hasOwnProperty('log')) {
return st.end(err => {
if (err) return done (err);
ChangelogModel.findOne({}).sort({_id: -1}).skip(options.log.skip? options.log.skip : 0)
.lean().exec((err, data) => { // latest entry
if (err) return done(err);
should(data).have.only.keys('_id', 'action', 'collection_name', 'conditions', 'data', 'user_id', '__v');
should(data).have.property('action', options.method.toUpperCase() + ' ' + options.url);
should(data).have.property('collection_name', options.log.collection);
if (options.log.hasOwnProperty('data')) {
should(data).have.property('data', options.log.data);
}
else {
const ignore = ['_id', '__v'];
if (options.log.hasOwnProperty('dataIgn')) {
ignore.push(...options.log.dataIgn);
}
let tmp = options.req ? options.req : {};
if (options.log.hasOwnProperty('dataAdd')) {
_.assign(tmp, options.log.dataAdd)
}
should(IdValidate.stringify(_.omit(data.data, ignore))).be.eql(_.omit(tmp, ignore));
}
if (data.user_id) {
should(data.user_id.toString()).be.eql(this.auth[options.auth.basic].id);
}
done();
});
});
}
else { // return object to do .end() manually
return st;
}
}
static afterEach (server, done) {
server.close(done);
}
static afterEach (server, done) {
server.close(done);
}
static after(done) {
db.disconnect(done);
}
static after(done) {
db.disconnect(done);
}
}

16
src/test/loadDev.ts
View File

@ -3,12 +3,12 @@ import db from '../db';
// script to load test db into dev db for a clean start
db.connect('dev', () => {
console.info('dropping data...');
db.drop(() => { // reset database
console.info('loading data...');
db.loadJson(require('./db.json'), () => {
console.info('done');
process.exit(0);
});
});
console.info('dropping data...');
db.drop(() => { // reset database
console.info('loading data...');
db.loadJson(require('./db.json'), () => {
console.info('done');
process.exit(0);
});
});
});