fixed double unwinding with spectrum filter
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VLE2FE
parent
6702fb78c4
commit
9297b63a28
@ -7,7 +7,6 @@ import TestHelper from "../test/helper";
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import mongoose from 'mongoose';
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describe('/sample', () => {
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let server;
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before(done => TestHelper.before(done));
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@ -255,6 +254,24 @@ describe('/sample', () => {
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done();
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});
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});
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it('unwinds only once when filtering for spectrum measurements and including the dpt field', done => {
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TestHelper.request(server, done, {
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method: 'get',
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url: '/samples?status[]=new&status[]=validated&fields[]=number&fields[]=measurements.spectrum.device&fields=measurements.spectrum.dpt&filters[]=%7B%22mode%22%3A%22eq%22%2C%22field%22%3A%22measurements.spectrum.device%22%2C%22values%22%3A%5B%22Alpha%20II%22%5D%7D',
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auth: {basic: 'admin'},
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httpStatus: 200
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}).end((err, res) => {
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if (err) return done(err);
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const json = require('../test/db.json');
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should(res.body).have.lengthOf(json.collections.measurements.filter(e => e.values.device === 'Alpha II' && e.status !== 'deleted').length);
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should(res.body).matchEach(sample => {
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should(sample).have.only.keys('number', 'spectrum');
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should(sample.spectrum).have.only.keys('device', 'dpt');
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should(sample.spectrum).have.property('device', 'Alpha II');
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});
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done();
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});
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})
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it('adds the status if specified', done => {
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TestHelper.request(server, done, {
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method: 'get',
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@ -289,7 +306,7 @@ describe('/sample', () => {
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httpStatus: 200
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}).end((err, res) => {
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if (err) return done(err);
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should(res.body.filter(e => e.spectrum.dpt)).have.lengthOf(2);
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should(res.body.filter(e => e.spectrum.dpt)).have.lengthOf(3);
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should(res.body[0].spectrum).have.property('dpt', [[3997.12558,98.00555],[3995.08519,98.03253],[3993.04480,98.02657]]);
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should(res.body[1].spectrum).have.property('dpt', [[3996.12558,98.00555],[3995.08519,98.03253],[3993.04480,98.02657]]);
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done();
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@ -783,7 +800,7 @@ describe('/sample', () => {
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url: '/sample/400000000000000000000001',
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auth: {basic: 'janedoe'},
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httpStatus: 200,
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {device: 'Alpha II'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000009', sample_id: '400000000000000000000001', values: {device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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});
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});
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it ('returns spectral data for an admin user', done => {
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@ -792,7 +809,7 @@ describe('/sample', () => {
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url: '/sample/400000000000000000000001',
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auth: {basic: 'admin'},
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httpStatus: 200,
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {dpt: [[ 3997.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]],device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {dpt: [[ 3996.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]], device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {dpt: [[ 3997.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]],device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {dpt: [[ 3996.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]], device: 'Alpha II'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000009', sample_id: '400000000000000000000001', values: {dpt: [[ 3996.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]], device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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});
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});
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it('returns a deleted sample for a dev/admin user', done => {
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@ -1523,7 +1540,7 @@ describe('/sample', () => {
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url: '/sample/number/1',
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auth: {basic: 'janedoe'},
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httpStatus: 200,
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {device: 'Alpha II'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000009', sample_id: '400000000000000000000001', values: {device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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});
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});
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it ('returns spectral data for an admin user', done => {
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@ -1532,7 +1549,7 @@ describe('/sample', () => {
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url: '/sample/number/1',
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auth: {basic: 'admin'},
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httpStatus: 200,
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {dpt: [[ 3997.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]],device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {dpt: [[ 3996.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]], device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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res: {_id: '400000000000000000000001', number: '1', type: 'as-delivered/raw', color: 'black', batch: '', condition: {material: 'copper', weeks: 3, condition_template: '200000000000000000000001'}, material: {numbers: ['5513933405'], _id: '100000000000000000000004', name: 'Schulamid 66 GF 25 H', properties: {material_template: '130000000000000000000003', mineral: 0, glass_fiber: 25, carbon_fiber: 0}, group: 'PA66', supplier: 'Schulmann'}, user: 'janedoe', notes: {}, measurements: [{_id: '800000000000000000000001', sample_id: '400000000000000000000001', values: {dpt: [[ 3997.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]],device: 'Alpha I'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000007', sample_id: '400000000000000000000001', values: {dpt: [[ 3996.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]], device: 'Alpha II'}, measurement_template: '300000000000000000000001'}, {_id: '800000000000000000000009', sample_id: '400000000000000000000001', values: {dpt: [[ 3996.12558, 98.00555 ], [ 3995.08519, 98.03253 ], [ 3993.0448, 98.02657 ]], device: 'Alpha II'}, measurement_template: '300000000000000000000001'}], status: 'validated'}
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});
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});
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it('returns 403 for a write user when requesting a deleted sample', done => {
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@ -228,13 +228,20 @@ router.get('/samples', async (req, res, next) => {
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if (measurementTemplates.length < measurementFilterFields.length) {
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return res.status(400).json({status: 'Invalid body format', details: 'Measurement key not found'});
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}
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queryPtr.push({$lookup: {
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from: 'measurements', let: {sId: '$_id'},
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pipeline: [{$match: {$expr: {$and: [
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const pipeline: any[] = [{$match: {$expr: {$and: [
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{$eq: ['$sample_id', '$$sId']},
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{$in: ['$measurement_template', measurementTemplates.map(e => mongoose.Types.ObjectId(e._id))]}
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]}}}
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],
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];
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if (measurementFilterFields.indexOf(globals.spectrum.spectrum) >= 0) { // filter out dpts
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pipeline.push(
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{$project: {'values.device': true, measurement_template: true}},
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{$addFields: {'values._id': '$_id'}}
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);
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}
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queryPtr.push({$lookup: {
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from: 'measurements', let: {sId: '$_id'},
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pipeline: pipeline,
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as: 'measurements'
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}});
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const groupedMeasurementTemplates = measurementTemplates.reduce((s, e) => {
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@ -323,9 +330,17 @@ router.get('/samples', async (req, res, next) => {
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}
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// use different lookup methods with and without dpt for the best performance
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if (fieldsToAdd.find(e => e.indexOf(globals.spectrum.spectrum + '.' + globals.spectrum.dpt) >= 0)) { // with dpt
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queryPtr.push(
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{$lookup: {from: 'measurements', localField: '_id', foreignField: 'sample_id', as: 'measurements'}}
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);
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// spectrum was already used for filters
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if (sortFilterKeys.find(e => new RegExp('measurements\\.' + globals.spectrum.spectrum).test(e))) {
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queryPtr.push(
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{$lookup: {from: 'measurements', localField: 'spectrum._id', foreignField: '_id', as: 'measurements'}}
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);
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}
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else {
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queryPtr.push(
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{$lookup: {from: 'measurements', localField: '_id', foreignField: 'sample_id', as: 'measurements'}}
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);
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}
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}
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else {
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queryPtr.push({$lookup: {
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@ -705,11 +720,7 @@ async function materialCheck (sample, res, next) {
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// validate treatment template, returns false if invalid, otherwise template data
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async function conditionCheck (condition, param, res, next, checkVersion = true) {
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console.log(condition);
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console.log(condition.condition_template);
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console.log(IdValidate.valid(condition.condition_template));
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if (!condition.condition_template || !IdValidate.valid(condition.condition_template)) { // template id not found
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console.log('A');
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res.status(400).json({status: 'Condition template not available'});
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return false;
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}
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@ -717,7 +728,6 @@ async function conditionCheck (condition, param, res, next, checkVersion = true)
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.lean().exec().catch(err => next(err)) as any;
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if (conditionData instanceof Error) return false;
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if (!conditionData) { // template not found
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console.log('B');
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res.status(400).json({status: 'Condition template not available'});
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return false;
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}
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@ -492,6 +492,21 @@
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"status": "deleted",
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"measurement_template": {"$oid":"300000000000000000000001"},
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"__v": 0
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},
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{
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"_id": {"$oid":"800000000000000000000009"},
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"sample_id": {"$oid":"400000000000000000000001"},
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"values": {
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"dpt": [
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[3996.12558,98.00555],
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[3995.08519,98.03253],
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[3993.04480,98.02657]
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],
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"device": "Alpha II"
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},
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"status": "validated",
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"measurement_template": {"$oid":"300000000000000000000001"},
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"__v": 0
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}
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],
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"condition_templates": [
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