Merge pull request #46 in DEFINMA/definma-api from proper-indentation to master

* commit '7c5b6ec605e7ecd3d4cc9ba59c41f45ef4783c80':
  Properly indent all source files

package-lock.json

@@ -1,6 +1,6 @@
 {
-  "name": "dfop-api",
-  "version": "1.0.0",
+  "name": "definma-api",
+  "version": "0.9.1",
   "lockfileVersion": 1,
   "requires": true,
   "dependencies": {

src/routes/material.ts

@@ -109,7 +109,7 @@ router.delete('/material/' + IdValidate.parameter(), (req, res, next) => {
 
 	// check if there are still samples referencing this material
 	SampleModel.find({'material_id': new mongoose.Types.ObjectId(req.params.id), status: {$ne: globals.status.del}})
-    .lean().exec((err, data) => {
+.lean().exec((err, data) => {
 	if (err) return next(err);
 	if (data.length) {
 		return res.status(400).json({status: 'Material still in use'});
@@ -124,7 +124,7 @@ router.delete('/material/' + IdValidate.parameter(), (req, res, next) => {
 			res.status(404).json({status: 'Not found'});
 		}
 	});
-  });
+});
 });
 
 router.put('/material/restore/' + IdValidate.parameter(), (req, res, next) => {
@@ -190,12 +190,12 @@ module.exports = router;
 
 async function nameCheck (material, res, next) {  // check if name was already taken
 	const materialData = await MaterialModel.findOne({name: material.name}).lean().exec().catch(err => next(err)) as any;
-  if (materialData instanceof Error) return false;
-  if (materialData) {  // could not find material_id
+if (materialData instanceof Error) return false;
+if (materialData) {  // could not find material_id
 	res.status(400).json({status: 'Material name already taken'});
 	return false;
-  }
-  return true;
+}
+return true;
 }
 
 async function groupResolve (material, req, next) {

src/routes/measurement.ts

@@ -47,23 +47,23 @@ router.put('/measurement/' + IdValidate.parameter(), async (req, res, next) => {
 
 	// add properties needed for sampleIdCheck
 	measurement.measurement_template = data.measurement_template;
-  measurement.sample_id = data.sample_id;
-  if (!await sampleIdCheck(measurement, req, res, next)) return;
+measurement.sample_id = data.sample_id;
+if (!await sampleIdCheck(measurement, req, res, next)) return;
 
-  // check for changes
-  if (measurement.values) {  // fill not changed values from database
+// check for changes
+if (measurement.values) {  // fill not changed values from database
 	measurement.values = _.assign({}, data.values, measurement.values);
 	if (!_.isEqual(measurement.values, data.values)) {
 		measurement.status = globals.status.new;  // set status to new
 	}
-  }
+}
 
-  if (!await templateCheck(measurement, 'change', res, next)) return;
-  await MeasurementModel.findByIdAndUpdate(req.params.id, measurement, {new: true})
-    .log(req).lean().exec((err, data) => {
+if (!await templateCheck(measurement, 'change', res, next)) return;
+await MeasurementModel.findByIdAndUpdate(req.params.id, measurement, {new: true})
+.log(req).lean().exec((err, data) => {
 	if (err) return next(err);
 	res.json(MeasurementValidate.output(data, req));
-  });
+});
 });
 
 router.delete('/measurement/' + IdValidate.parameter(), (req, res, next) => {

src/routes/template.ts

@@ -128,9 +128,9 @@ router.put('/template/:collection(measurement|condition|material)/' + IdValidate
 			   else {
 				   res.json(TemplateValidate.output(templateData));
 			   }
-});
+		   });
 
-router.post('/template/:collection(measurement|condition|material)/new', async (req, res, next) => {
+		   router.post('/template/:collection(measurement|condition|material)/new', async (req, res, next) => {
 			   if (!req.auth(res, ['dev', 'admin'], 'basic')) return;
 
 			   const {error, value: template} = TemplateValidate.input(req.body, 'new');
@@ -144,15 +144,15 @@ router.post('/template/:collection(measurement|condition|material)/new', async (
 				   db.log(req, req.params.collection + '_templates', {_id: data._id}, data.toObject());
 				   res.json(TemplateValidate.output(data.toObject()));
 			   });
-});
+		   });
 
 
-module.exports = router;
+		   module.exports = router;
 
-function model (req) {  // return right template model
+		   function model (req) {  // return right template model
 			   switch (req.params.collection) {
 				   case 'condition': return ConditionTemplateModel
 				   case 'measurement': return MeasurementTemplateModel
 				   case 'material': return MaterialTemplateModel
 			   }
-}
+		   }

src/routes/user.ts

@@ -186,28 +186,28 @@ module.exports = router;
 
 function getUsername (req, res) {  // returns username or false if action is not allowed
 	req.params.username = req.params[0];  // because of path regex
-  if (req.params.username !== undefined) {  // different username than request user
+if (req.params.username !== undefined) {  // different username than request user
 	if (!req.auth(res, ['admin'], 'basic')) return false;
 	return req.params.username;
-  }
-  else {
+}
+else {
 	return req.authDetails.username;
-  }
+}
 }
 
 async function usernameCheck (name, res, next) {  // check if username is already taken
 	const userData = await UserModel.findOne({name: name}).lean().exec().catch(err => next(err)) as any;
-  if (userData instanceof Error) return false;
-  if (userData || UserValidate.isSpecialName(name)) {
+if (userData instanceof Error) return false;
+if (userData || UserValidate.isSpecialName(name)) {
 	res.status(400).json({status: 'Username already taken'});
 	return false;
-  }
-  return true;
+}
+return true;
 }
 
 async function modelsCheck (models, res, next) {  // check if model ids exist, returns false on error
 	let result = true;
-  for (let i in models) {
+for (let i in models) {
 	const model = await ModelModel.findOne({'models._id': mongoose.Types.ObjectId(models[i])})
 	.lean().exec().catch(err => next(err)) as any;
 	if(!model) {
@@ -215,6 +215,6 @@ async function modelsCheck (models, res, next) {  // check if model ids exist, r
 		result = false;
 		break;
 	}
-  }
-  return result;
+}
+return result;
 }

src/routes/validate/measurement.ts

@@ -7,14 +7,14 @@ export default class MeasurementValidate {
 	private static measurement = {
 		values: Joi.object()
 		.pattern(/.*/, Joi.alternatives()
-        .try(
+.try(
 	Joi.string().max(128),
 	Joi.number(),
 	Joi.boolean(),
 	Joi.array().items(Joi.array().items(Joi.number())),  // for spectra
 		Joi.array()
-        )
-        .allow(null)
+)
+.allow(null)
 				)
 	};
 

src/routes/validate/sample.ts

@@ -41,12 +41,12 @@ export default class SampleValidate {
 
 			custom_fields: Joi.object()
 			.pattern(/.*/, Joi.alternatives()
-          .try(
+.try(
 	Joi.string().max(128),
 	Joi.number(),
 	Joi.boolean(),
 	Joi.date()
-          )
+)
 					)
 		}),